Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02170 ATGAAGAAGATCAATCTATTACTCCGAAAATGCAAGAGTTTGTCAAGGCAGCTAGGAAGATCTTCATCTTATAGCAGCCTGAGGTCAAAATCCACAAAAGAAGACATATGGGGGGGTGGACATGGAATGCAAGAAGATGAAAATTGTGAAACTATATTTGTTGGCAGCACAAGGAAACGGTACATAATCAGCAAAAAGTATCTGAACCATCCTCTTCTGAATGCACTAATCAACAAGTCAAAGCAAATTAAGAAGGACAGTGATGAAAGTAGTGTGTTGGTGGTCAACTGTGAGGTGGTTCTCTTTGATCATCTATTGTGGATGCTAGAAAATGCAGATCCCAAGTTTAGTTCTGAGTCTTTGGAGGAATTGGCTGAACTCTATGTGTTTTGA 393 0.3944 MKKINLLLRKCKSLSRQLGRSSSYSSLRSKSTKEDIWGGGHGMQEDENCETIFVGSTRKRYIISKKYLNHPLLNALINKSKQIKKDSDESSVLVVNCEVVLFDHLLWMLENADPKFSSESLEELAELYVF 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02170 130 PANTHER EXPRESSED PROTEIN 3 130 - -
Gma08g02170 130 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 130 IPR003676 GO:0009733
Gma08g02170 130 Pfam Auxin responsive protein 35 109 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02170 Gma-Chr8 20373707 20374544 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02170 51 111 Calmodulin-binding Proteins AT5G20810 36.066 3.01e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02170 - - gmx:100500162 233.417