Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma08g02165 | ATGTGGAATGAAGAAAGCGATTGGATCGGTTCCTTTGATTCTCAGTTGGCGCGGTTGGCGGAGTGCAGGATGTGTTCGCGCGACAGAGGGGAGCGCCCCGACGCGACGGGGATGGACTTAGAGGTGCTGGAGGTGGCCGAGGAGGGCAGTTACGGGCGGGTGTTCCGGTGCCTCGACATCCACACCGGCGCCCTCGTGACCATGAAGCAGATCACGATGGTCCGCTTGAGCCAGGGCGTTCCGGCGCCAATAATCCGTGAAGTGTCGCTCCTCAAAGAACTCCACCACGCCAACATCGTGAAGCTGCTCAGGGTGGGACTAACCGAGAATAGGTACGTCAACCTCGTCTTCGAGCATCTTGATTACGATCTTCATCACTTCATTGTCAACCGAGGTTACCCCAAGGATGCCTTGACTGTTAAGAGTTTCATGTACCAGATACTCTCTGCTGTGGCTTACTGTCACTCGCTTAAGGTTCTGCACAGAGATTTGAAACCAAGCAATGTGCTGATTGATCATTCCAAAAGGTTGATCAAGTTGGCGGATTTCCGTTTGGCTGGAGAGTTTGCAGATGACTTGTTATATACTGAGAAGTTAGGAACTTCCTGGTACAGGGCACCTGAAATCTTGTGTGACTCTAGACAATATTCAACTCAAATTGATTTGTGGTCTGTTGGCTGCATATTTGCTGAGATGGTAATTGGACAGCCTTTAGTCCAAGCTATTAATTGCCGGGATGAATTGGAGGGGATTTTCAAATTATTAGGTACCCCCACAGAGGAAACATGGCCAGGAATCACCAAATTAATGCCTAACCTTCATATCTACTACCCCAAATTTGATGCATTGGGCCTGGAAACATTTGTTACTGATCTGGAACCAAGTGGCCTGAATCTACTATCAATGATGCTTTGCTTGGACCCAAGTAGAAGGATTTCTGCGGAAGCTGCTCTAAAGCATGCTTACTTTATAGATGTTAATTATGTATCTCTTCTGCTTCTCTAA | 1005 | 0.4806 | MWNEESDWIGSFDSQLARLAECRMCSRDRGERPDATGMDLEVLEVAEEGSYGRVFRCLDIHTGALVTMKQITMVRLSQGVPAPIIREVSLLKELHHANIVKLLRVGLTENRYVNLVFEHLDYDLHHFIVNRGYPKDALTVKSFMYQILSAVAYCHSLKVLHRDLKPSNVLIDHSKRLIKLADFRLAGEFADDLLYTEKLGTSWYRAPEILCDSRQYSTQIDLWSVGCIFAEMVIGQPLVQAINCRDELEGIFKLLGTPTEETWPGITKLMPNLHIYYPKFDALGLETFVTDLEPSGLNLLSMMLCLDPSRRISAEAALKHAYFIDVNYVSLLLL | 334 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma08g02165 | 334 | SMART | serkin_6 | 40 | 323 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma08g02165 | 334 | Gene3D | Transferase(Phosphotransferase) domain 1 | 120 | 323 | - | - | |
Gma08g02165 | 334 | ProSiteProfiles | Protein kinase domain profile. | 40 | 323 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma08g02165 | 334 | Pfam | Protein kinase domain | 48 | 323 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma08g02165 | 334 | PANTHER | CYCLIN-DEPENDENT KINASE | 18 | 329 | - | - | |
Gma08g02165 | 334 | SUPERFAMILY | Protein kinase-like (PK-like) | 41 | 328 | IPR011009 | - | |
Gma08g02165 | 334 | PANTHER | CELL DIVISION PROTEIN KINASE | 18 | 329 | - | - | |
Gma08g02165 | 334 | Gene3D | Phosphorylase Kinase; domain 1 | 41 | 119 | - | - | |
Gma08g02165 | 334 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 159 | 171 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma08g02165 | Gma-Chr8 | 20218954 | 20222164 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma08g02165 | 41 | 327 | Core Cell Cycle Gene Families | AT3G48750 | 48.443 | 3.14e-89 | 267 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-Pl | Gma08g02165 | Pkinase | 2.9e-63 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma08g02165 | K02206 | - | gmx:100810997 | 676.781 |