Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02160 ATGGTTACAGGGAAACACAACGGCGGAGTTACCAACAAAGCCGCATTGGAAGCCACACGAATAACGGTGTCGTTTTTTGTCAATGAGCTCAGGGGAAATGGAAATGGAAATGGAAAGGAAAACAATGATAATGTTAACATTCCTTTGAGTGTTGTAGACACAAATGGCGTTGTTTACGAGCTTCAGGTGTTGGTAAAGACGGGTTCAGATAGTCGATCCTATATAGCCAAAGCGGGAGCAATTTTGCTACTAGATCGGTTCCTTAATGCAAAGGAGAATTTGAGCCTACAAGCTAACACCGTGATGACGACGACGATGAAGGTGTTTAGCTTGTCAGAGGGGGCAAGGAGGGACGCGTTGGCGGCGATGTTGAATTTGGTGGCAGATAAGGAGACAGTGGCAAGGTTGGTGGAGAGGGGTGTGGTGGGGATATCAGCAATGTCGGAAGAAGGGTTGACGATTCTAGAGGCGGTGGTGAAAAGGGGTGGGTTGGTGGCAATGGCAGTGGCATACGTCGCAATTAAGAGGCTAGGGGCGGTGCTGAGGGAAGGATGGGAGAGAGTGAGGGAGAGCGTGGCGGCGATGCTAGTGACTCGGTTGAGGATTCCACGGCGGCAAGGCTTAATGGCAGGGAGAAGGAAAGGTTCACGACAACTACTACCATGGTTTCTTCGTCAACTATATTGA 687 0.4964 MVTGKHNGGVTNKAALEATRITVSFFVNELRGNGNGNGKENNDNVNIPLSVVDTNGVVYELQVLVKTGSDSRSYIAKAGAILLLDRFLNAKENLSLQANTVMTTTMKVFSLSEGARRDALAAMLNLVADKETVARLVERGVVGISAMSEEGLTILEAVVKRGGLVAMAVAYVAIKRLGAVLREGWERVRESVAAMLVTRLRIPRRQGLMAGRRKGSRQLLPWFLRQLY 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02160 228 PANTHER U BOX DOMAIN-CONTAINING 113 201 - -
Gma08g02160 228 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 16 113 201 - -
Gma08g02160 228 PANTHER U BOX DOMAIN-CONTAINING 5 103 - -
Gma08g02160 228 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 16 5 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02160 Gma-Chr8 20141125 20141891 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02160 114 201 U-box Gene Family AT5G01830 45.161 2.38e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02160 - - gmx:100784832 176.792