Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02104 ATGGACCCGAAAACCCCATATGAGAATTCTTCCAATTTTGATTCTTTCATGTTCAACTCGTCATCACCTAGAAGTGACATGTCCATTCAGTCTAGGAGTTCTGGCAGGGACAACTCCACCCGTGAAGTGAGTTTCGGCCACACAGGATCCAAGCCTGTGAGGCATGGGTCAAATTCTGAAGGTCTAAGCATGTCTCAGAAGGAAATCAGTGATGAGGATGCAAGGTTGGTTTATGTTGATGATCCTGAGAAGACAAATGAAAGGCTCAAATTCGCGGGGAATTCGATTCGAACCGGGAAGTACTCCATCTTCACCTTTCTTCCAAGGAATTTGTTTGAACAGTTTCGTAGAGTTGCTTATATTTACTTCCTTGTAATTGCCATTCTCAATCAGCTCCCTCAGTTGGCTGTCTTTGGGAGGGGTGTTTCCATTATGCCATTGACCTTTGTCCTTGTTGTTACTGCTGTGAAGGATGCATTTGAGGACTGGAGGAAGCACAGGTCAGACAAAATTGAGAACAACAGGTTAGCATTGGTTTTGGTTAATGGTCAGTTTCAAGAGAAGAAGTGGAAGGATGTCAGGGTTGGGGAGGTCATTAAAATAAGTGCAAATGAAACAATTCCTTGTGATATTGTGTTGCTATCAACTAGTGACCCTACTGGGGTTGCTTATGTGCAGACTATTAATCTGGATGGAGAGTCTAATTTGAAGACTAGGTACACGAAACAAGAGACTCAATCTATGTTTCCTGAAAAGGAGAGGTTGAATGGATTGATTGTGTGTGAGAAACCCAATAGGAATATATATGGGTTTCAGGGTTATATGGAAATTGATGGAAAGAGATTGTCTCTTGGATCCTCCAACATTGTCATTAGAGGCTGCCAGCTCAAGAATACTAATTGGGCACTTGGCGTTGCCGTGTATTGTGGCAGAGAGACCAAAGCTATGCTCAACAGCTCTGGAGCTCCATCGAAAAGGAGCCTTCTCGAGACTCGCATGAACTCTGAGATCATTATGCTTTCTTTCTTTCTTATAGCTTTGTGCACAGTCACCTCAGTTTGTGTTGCTGTTTGGTTAAAGCGCCACAAGGATGAGTTGAATCTCTCCCCGTATTATAGGAAAATGGATGTTTCAGAGGGGGAAGAGGATAGCTATAAATATTATGGATGGGTACTGGAAATTGTTTTCACTTTCCTCATGTCAATTATAGTGTTTCAGATTATGATCCCCATATCCTTGTACATTTCCATGGAGCTTGTCCGTGTTGGTCAGGCATACTTCATGATCCGAGACTCGAGAATGTATGATAAGGCGACAGATTCAGGATTTCAGTGCAGGGCTTTGAATATTAATGAAGATTTGGGCCAAATTAAATATGTCTTTTCTGACAAAACTGGTACACTGACTGAGAACAAGATGGAGTTTCAATGCGCGAGCATCTTGGGGTTTGATTACAGTTCTGCAAAAATGGGTCCTGAGAATGAGCAAGTTGAATACTCTGTTCAAGAGGATGGGAAGGTCTTTAAGCCAAAGATGAGGGTGAAAGTTAACCAAGAGCTTTTGCAATTATCAAAAAGTGGATTTGCAAATAGAGAGGGGAAACAGATTTATGATTTCTTTCTAGCATTGGCAGCCTGCAATACCATTGTGCCTCTTGTTGTTGACACATCCGATCCTATGGTCAAGCTAATAGATTACCAAGGGGAATCACCAGATGAACAAGCGTTGGCTTATGCTGCCGCTGCCTATGGTTTTATGCTTATTGAACGAACCTCAGGTCACATAGTCGTTAATATTCATGGAGAAAAACAAAGGTTCAATGTCTTAGGTTTGCATGAATTTGATAGTGATCGAAAAAGGATGACAGTTATATTAGGGTACAGTAACAATTCTGTGAAACTTTTTGTTAAAGGGGCAGATACATCCATGTTTAGTGTGATAGACAAATCATTGAACTCAGATATACTACAAGCAACTGAAACCCATCTTCACTCTTATTCCTCTGTGGGTTTGAGGACACTTGTTATTGGCATGCGTGACTTGAATGCTTCAGAATTTGAGCAATGGCACTCTGCCTTTGAGGCAGCAAGTACTGCTTTGATTGGTAGGGCCTCTATGCTTCGCAAGGTTGCTATCAATGTAGAGAACAATCTCTGCATATTGGGTGCAACTGCTATTGAAGATAAACTGCAGCAAGGCGTACCAGAATCCATTGAGTCTCTAAGGACTGCAGGTATTAAAGTATGGGTCTTGACTGGGGACAAACAGCAAACTGCCATATCAATTGGATGCTCCTCGAAGCTCCTAACGAGCAACATGACTCAAATTATAATTAATACCAACAATAGAGAGTCATGTAGAAGATGTTTGCAAGACGCCCTTGTCATGTCTAGAAAACACATGACTGTGCCTGGGGTTACTCACAATTCTGAAGGAAGATCAGATGCTGTTTCAACTCCATTAGCCTTGATTATTGATGGTACCAGCCTTGTTTATATTCTTGACAGCGAGCTTGAAGAAGAGCTCTTTCAACTAGCAAATAGATGTTCTGTTGTTCTCTGTTGTCGAGTGGCTCCGCTGCAGAAGGCTGGGATTGTAGCCCTTGTGAAGAATAGGACCGATGACATGACACTAGCCATTGGAGATGGTGCTAATGACGTATCAATGATCCAAATGGCTCATGTTGGAGTTGGAATCAGTGGACAGGAGGGTCGGCAAGCTGTAATGGCTTCAGATTTTGCAATTGGGCAGTTTAGGCTTTTAGTTCCTCTCTTATTAATACATGGGCATTGGAATTACCAACGACTGGGTTACATGATAATATACAACTTCTACAGAAATGCTATCTTTGTTCTTGTCCTATTTTGGTATGTGCTCTTTACTGCTTTCTCTTTGACAACTGCTATAAATGAATGGAGCAGCGTGTTATATTCAATAATTTACTCTGCAGTTCCAACTATTGTTGTTGGTGTTCTTGACAAGGATCTTAGTAAAAGGACTCTCCTAAAGCATCCTCAGCTTTATGGGGCTGGGCTGAGACAGGAGGCCTACAACAAAAAGTTGTTTTGGTTGTCAATGGCCGATACTTTGTGGCAAAGCATTGCTGTTTTCTTTACTCCCCTAATCGCATATTGGGGAACCACTGAAGATGTAGCAAGCATAGGAGATCTTTGGACTCTTTCAGTGGTTATTTTGGTTAATTTGCACTTGGCCATGGATGTCATCAGGTGGAATTGGATTACGCATGCAGCAATTTGGGGCTCTATAGTTGCAACTTTCATTTGTATCATTATTATTGATGCTATACCAGCCTTTCCTGGTTTCTGGGCTATCTTTCATGCTGCAGGCACTGGATTGTTCTGGCTATGTTTGCTCGGAACTGTGATAGCCGCATTACTTCCTCGATTGGTTGTAAAATATATGAATCAGTATTATTTTCCCAGCGACATTCAGATTTCGAGAGAAGCTGAGAAGTTTGGGAATCCAAGAGACAATGGAGTTGGACAGATAGAAATGCTTCCTGTTTCAGATGGCATCTCCCAAGTTGGAGATTCTGCAATAAAGCTTTTTGGAGCAGATATTCGCAATATTCTTCATTTTCCCATTAAGCCAACCACTCACTTCACAGATTTCCAACTCTCTTTGACTCAGTGTGAGATTCAGCGTCTGCCTCAACCCATCATCATCATGAATGGACTCGAAGAATCAACTAACGATGAAGTGGATGTTCCATTGAATGAAGTATCTAGCAAACAGATTGATCCTCAAGAAGATGGTAATAGTGCTCCAAACATTTACAAAAATCCTACACTGAAACTGGTGGCCAAAGTAGTTAATGGGAATAATGAGCATAGGAATGCCAAAAGAGATATTGATCATCAAGAAAAAGTTTTGAAGAGGGCAAACAAGGTCCTGCCTTGTCCTCGTTGCAATAGTTCGGAGACAAAGTTTTGCTACTTCAACAATTATAATGTTAACCAACCTAGGCATTTCTGTAAAAATTGCCAAAGGTATTGGACAGCTGGGGGGACAATTAGAAATGTTCCTCTTGGGGCTGGTAAGCGTAAGAATAAGCACTCGACTTTGCAGTATTGTCTGATACCTGTGACTCCTGATGCTGCATCTGTCAGCCAGACAGATTCCAAACCTGCTAGTGATATGCTTTTATCATCTAGCAGACTTATCAAAGGGATGGAGAACATCTCAAGTCTCAGGGAGGAAACTCCTCTTAGTGAATCCTTAGAAACTGTGTTAAGTCTCAATGGCCAGACAAATATTGAAATGGCCTCTTCCACTCTCAAAGATGATGCTGAGGAGTCTTCCAGCTCTTCTATGAGATCTAATGAAGTAGAGCAGGAGCTTAGGCCTAGAAGCTTAAGTTCTAGACCTGTTTACACAGGTTCTCCAACTATGATTGCAGTTCCTGGCTTCTCCTTACCAACAGTAATACTTCCAGGGGTGCCTTATTCATATTCGGGTTTTATGTCAAACTGGGATGAACAAAAGGAAGATGCTTCATTGGTTGGATCTGCATTTAGTGGCATATCATTGTCTCCATCTTCAGTTAGCAACAGTACTTGTTCAGGTAATAGGTCCCCAACCTTGGGAAAACATTCTAGAGATGGAAGTACACTGGGGGAAGATGCAATGAAACAGAATCTTTGGGTGCCCAAGACTGTAAGAATTAATGACCCAGAAGAGGCTGCAAATAGTTCTATATGGTCAACTTTGGGAACAAAGTCTGAACAGAACAAACTCATTATGAAAGGAAGTATTTTTAAATCATTTGAACCTAAGGCAAGTGCCAGTTCTCATATTTTAGAGGATAATCAAATTCTAAGGGCCAACCCTGCAGCTTTCTCGCGCTCTGAGTCTTTTCAGGAAAGCATGTAA 4893 0.4155 MDPKTPYENSSNFDSFMFNSSSPRSDMSIQSRSSGRDNSTREVSFGHTGSKPVRHGSNSEGLSMSQKEISDEDARLVYVDDPEKTNERLKFAGNSIRTGKYSIFTFLPRNLFEQFRRVAYIYFLVIAILNQLPQLAVFGRGVSIMPLTFVLVVTAVKDAFEDWRKHRSDKIENNRLALVLVNGQFQEKKWKDVRVGEVIKISANETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYTKQETQSMFPEKERLNGLIVCEKPNRNIYGFQGYMEIDGKRLSLGSSNIVIRGCQLKNTNWALGVAVYCGRETKAMLNSSGAPSKRSLLETRMNSEIIMLSFFLIALCTVTSVCVAVWLKRHKDELNLSPYYRKMDVSEGEEDSYKYYGWVLEIVFTFLMSIIVFQIMIPISLYISMELVRVGQAYFMIRDSRMYDKATDSGFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASILGFDYSSAKMGPENEQVEYSVQEDGKVFKPKMRVKVNQELLQLSKSGFANREGKQIYDFFLALAACNTIVPLVVDTSDPMVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIVVNIHGEKQRFNVLGLHEFDSDRKRMTVILGYSNNSVKLFVKGADTSMFSVIDKSLNSDILQATETHLHSYSSVGLRTLVIGMRDLNASEFEQWHSAFEAASTALIGRASMLRKVAINVENNLCILGATAIEDKLQQGVPESIESLRTAGIKVWVLTGDKQQTAISIGCSSKLLTSNMTQIIINTNNRESCRRCLQDALVMSRKHMTVPGVTHNSEGRSDAVSTPLALIIDGTSLVYILDSELEEELFQLANRCSVVLCCRVAPLQKAGIVALVKNRTDDMTLAIGDGANDVSMIQMAHVGVGISGQEGRQAVMASDFAIGQFRLLVPLLLIHGHWNYQRLGYMIIYNFYRNAIFVLVLFWYVLFTAFSLTTAINEWSSVLYSIIYSAVPTIVVGVLDKDLSKRTLLKHPQLYGAGLRQEAYNKKLFWLSMADTLWQSIAVFFTPLIAYWGTTEDVASIGDLWTLSVVILVNLHLAMDVIRWNWITHAAIWGSIVATFICIIIIDAIPAFPGFWAIFHAAGTGLFWLCLLGTVIAALLPRLVVKYMNQYYFPSDIQISREAEKFGNPRDNGVGQIEMLPVSDGISQVGDSAIKLFGADIRNILHFPIKPTTHFTDFQLSLTQCEIQRLPQPIIIMNGLEESTNDEVDVPLNEVSSKQIDPQEDGNSAPNIYKNPTLKLVAKVVNGNNEHRNAKRDIDHQEKVLKRANKVLPCPRCNSSETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTIRNVPLGAGKRKNKHSTLQYCLIPVTPDAASVSQTDSKPASDMLLSSSRLIKGMENISSLREETPLSESLETVLSLNGQTNIEMASSTLKDDAEESSSSSMRSNEVEQELRPRSLSSRPVYTGSPTMIAVPGFSLPTVILPGVPYSYSGFMSNWDEQKEDASLVGSAFSGISLSPSSVSNSTCSGNRSPTLGKHSRDGSTLGEDAMKQNLWVPKTVRINDPEEAANSSIWSTLGTKSEQNKLIMKGSIFKSFEPKASASSHILEDNQILRANPAAFSRSESFQESM 1630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02104 1630 Pfam Dof domain, zinc finger 1303 1359 IPR003851 GO:0003677|GO:0006355
Gma08g02104 1630 SFLD Haloacid Dehalogenase 444 931 - -
Gma08g02104 1630 SFLD p-type atpase 444 931 IPR044492 -
Gma08g02104 1630 CDD P-type_ATPase_APLT_Dnf-like 93 1040 - -
Gma08g02104 1630 SUPERFAMILY HAD-like 448 921 IPR036412 -
Gma08g02104 1630 Pfam Cation transport ATPase (P-type) 570 644 - -
Gma08g02104 1630 ProSitePatterns E1-E2 ATPases phosphorylation site. 463 469 IPR018303 -
Gma08g02104 1630 SUPERFAMILY Calcium ATPase, transmembrane domain M 87 1147 IPR023298 -
Gma08g02104 1630 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 467 733 IPR023299 GO:0000166
Gma08g02104 1630 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 91 1155 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gma08g02104 1630 ProSiteProfiles Zinc finger Dof-type profile. 1305 1359 IPR003851 GO:0003677|GO:0006355
Gma08g02104 1630 PRINTS P-type cation-transporting ATPase superfamily signature 880 899 - -
Gma08g02104 1630 PRINTS P-type cation-transporting ATPase superfamily signature 461 475 - -
Gma08g02104 1630 MobiDBLite consensus disorder prediction 1431 1465 - -
Gma08g02104 1630 Gene3D - 145 318 - -
Gma08g02104 1630 Gene3D - 717 918 IPR023214 -
Gma08g02104 1630 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 12 1178 - -
Gma08g02104 1630 MobiDBLite consensus disorder prediction 1522 1539 - -
Gma08g02104 1630 Pfam Phospholipid-translocating ATPase N-terminal 77 142 IPR032631 -
Gma08g02104 1630 Coils Coil 1284 1304 - -
Gma08g02104 1630 MobiDBLite consensus disorder prediction 1522 1544 - -
Gma08g02104 1630 ProSitePatterns Zinc finger Dof-type signature. 1307 1343 IPR003851 GO:0003677|GO:0006355
Gma08g02104 1630 Pfam Phospholipid-translocating P-type ATPase C-terminal 908 1148 IPR032630 -
Gma08g02104 1630 MobiDBLite consensus disorder prediction 1 65 - -
Gma08g02104 1630 Pfam E1-E2 ATPase 177 419 - -
Gma08g02104 1630 MobiDBLite consensus disorder prediction 1431 1449 - -
Gma08g02104 1630 MobiDBLite consensus disorder prediction 1 68 - -
Gma08g02104 1630 SUPERFAMILY Calcium ATPase, transduction domain A 174 315 IPR008250 -
Gma08g02104 1630 Gene3D - 561 699 IPR023299 GO:0000166
Gma08g02104 1630 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 851 965 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma08g02104 1630 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 12 1178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02104 Gma-Chr8 19015559 19028266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02104 1 1177 Primary Pumps ATPases AT5G04930 67.739 0.0 1691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gma08g02104 E1-E2_ATPase 3.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02104 K14802 - gmx:100791888 2301.94