Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02102 ATGGCTCTGTGCATATGGCTCAGCCAATACAGAGTTCATGCCGCCAACAAGCTCGAGTTGCGCCACCCGCGTGTCGCATTCTGTGAGGTGTGCGAGCAGGCGTCGGCGCATGTGACCTGCAAGGCTGACGCTGCCGCTCTCTGCCTCGCTTGCGACCGCGATATCCATTCTGCCAACCCCCTCGCCAGTTGCCACGAGCGCATCCCCGTCACGTCGTTCTTCGAGTCCGTACACTCAGTCAAGGCCTCCTCGCCAATCAATTTCCACCACCCCTTCTTCTCCGACGTCGACGCTGACGTCAGCACCGAGGAGGCCGAGGCCGCATCCTGGCTGCTAGCTAATCCGAAGACATATCTAAATTCGTCTCAGTACTTATTCTCCAAAACCGAATCAGTTCCTTACGTAGATCTGGATTACACAGCCATGGATTCGAAGACGGAGCAGAAAAGTTCTGCCACCGCTGACGGCGTCATTCCGGTGTAG 483 0.5694 MALCIWLSQYRVHAANKLELRHPRVAFCEVCEQASAHVTCKADAAALCLACDRDIHSANPLASCHERIPVTSFFESVHSVKASSPINFHHPFFSDVDADVSTEEAEAASWLLANPKTYLNSSQYLFSKTESVPYVDLDYTAMDSKTEQKSSATADGVIPV 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02102 160 SMART bboxneu5 23 70 IPR000315 GO:0008270
Gma08g02102 160 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 11 160 IPR045281 GO:0009909
Gma08g02102 160 ProSiteProfiles Zinc finger B-box type profile. 23 70 IPR000315 GO:0008270
Gma08g02102 160 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 3 11 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02102 Gma-Chr8 18989051 18989982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02102 11 160 C2C2-CO-like Transcription Factor Family AT5G24930 52.198 1.47e-45 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02102 - - gmx:100802376 259.996