LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma08g02098	ATGTTGGAACTACCATTCAATATGGCACTTCGGTTCCCCAAGTTGGATTTCAAGTCTTTTCCCTTTACTGAGAACCTCAACCCTGAATTGCTAGGTCACGTAGTTGCTCTTGTTGCCGTTGGCTTTACGGCTGCTTATATTTACTATCGCGCAAAACACCCCAAAGGAAGCTTGGACCCCAAAAATTTCAAGGAATTTAAACTCATAAAGAAGACTCAGCTCAGCCATAACGTTGCAAGATTCAAATTTGCCCTTCCTACTCCTTCTTCGGTATTGGGCCTTCCTGTTGGAAAAAACATACTTGCTAGCAGGGGAAAAGATAGCCAAGGAGAGGAAGTTATGAGATCATATACTCCAATCACGTTGGATTCAAATATTGGCTACTTCGAGTTGGTTGTGAAGATGTACCCGAATGGAAAGATGTCCCACCATTTTAGACAAATGAAGGAAGGTGATTTCTTGGCCGTGAGGGGCCCCAAGGGACGTTTCACTTACAAACCTGGCCAAGTTAGGGCATTTGGAATGATTGCTGGGGGCTCAGGCATAACTCCAATGTTTCAGCTCATAAGAGCCATTCTTGAAAACCCTAAGGACAAAACAAAGGTGCACCTTGTTTACGCCAATGTAACAGTGGACGACATTCTGTTAAAGGAAGAACTAGATAACTTTGCAAACAAATTTGCTCAAAGATTTGAAGTCTACCATGTTCTTAATAAGCCTCCTGAACAATGGAATGGTGGCATTGGATTTATATCGAAGGAGATTATTAAATCACATTGTCCTGAACCAGCCCAAGATATTCAGATACTTAGGTGTGGTCCACCACCTATGAATAAAGCCATGGCTACTCATCTTGACGCACTTGGCTACACATCTAACATGCAGTTCGAGTTCTAA	897	0.4247	MLELPFNMALRFPKLDFKSFPFTENLNPELLGHVVALVAVGFTAAYIYYRAKHPKGSLDPKNFKEFKLIKKTQLSHNVARFKFALPTPSSVLGLPVGKNILASRGKDSQGEEVMRSYTPITLDSNIGYFELVVKMYPNGKMSHHFRQMKEGDFLAVRGPKGRFTYKPGQVRAFGMIAGGSGITPMFQLIRAILENPKDKTKVHLVYANVTVDDILLKEELDNFANKFAQRFEVYHVLNKPPEQWNGGIGFISKEIIKSHCPEPAQDIQILRCGPPPMNKAMATHLDALGYTSNMQFEF	298

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma08g02098	298	Pfam	Oxidoreductase FAD-binding domain	66	165	IPR008333	-
	Gma08g02098	298	Gene3D	-	157	296	IPR039261	-
	Gma08g02098	298	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	1	298	IPR001834	GO:0016491
	Gma08g02098	298	ProSiteProfiles	Ferredoxin reductase-type FAD binding domain profile.	61	166	IPR017927	GO:0016491
	Gma08g02098	298	SUPERFAMILY	Riboflavin synthase domain-like	55	167	IPR017938	-
	Gma08g02098	298	Gene3D	Translation factors	56	156	-	-
	Gma08g02098	298	SUPERFAMILY	Ferredoxin reductase-like, C-terminal NADP-linked domain	154	293	IPR039261	-
	Gma08g02098	298	Pfam	Oxidoreductase NAD-binding domain	175	281	IPR001433	GO:0016491
	Gma08g02098	298	PRINTS	Cytochrome B5 reductase signature	92	103	-	-
	Gma08g02098	298	PRINTS	Cytochrome B5 reductase signature	268	276	-	-
	Gma08g02098	298	PRINTS	Cytochrome B5 reductase signature	212	223	-	-
	Gma08g02098	298	PRINTS	Cytochrome B5 reductase signature	174	193	-	-
	Gma08g02098	298	PRINTS	Cytochrome B5 reductase signature	151	165	-	-
	Gma08g02098	298	PRINTS	Cytochrome B5 reductase signature	115	122	-	-
	Gma08g02098	298	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	268	276	IPR001709	GO:0016491
	Gma08g02098	298	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	174	193	IPR001709	GO:0016491
	Gma08g02098	298	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	212	223	IPR001709	GO:0016491
	Gma08g02098	298	CDD	cyt_b5_reduct_like	66	298	-	-
	Gma08g02098	298	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	1	298	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma08g02098	Gma-Chr8	18935210	18941126	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma08g02098	46	298	NADPH P450 reductases	AT5G17770	67.589	1.91e-134	380

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma08g02098	K00326		-	gmx:100784114	599.356