Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma08g02094 | ATGAAGAGGTCTCCAGCATCTTCTTGTTCATCATCCACTTCCTCTGTTGGGTTTGAAGTTCATCATCCCATTGAAAAAAGAAGGCCTAAGCATCCAAGGAGGAATAATTTGAAGTCACAAAAATGCAAGCAGAACCAAACCACCACTGGTGGCAGAAGAAGCTCTATCTATAGAGGAGTTACAAGGCATAGGTGGACAGGGAGGTTTGAAGCTCACCTATGGGATAAGAGCTCTTGGAACAACATTCAGAGCAAGAAGGGTAAACAAGTTTATTTGGGGGCATATGATACTGAAGAATCTGCAGCACGTACCTATGACCTTGCAGCCCTTAAGTACTGGGGAAAAGATGCCACCCTGAATTTCCCGATAGAAACTTATACCAAGGACCTCGAGGAAATGGACAAGGTTTCAAGAGAAGAATATTTAGCTTCTTTGCGGCGCCAAAGCAGTGGCTTTTCTAGAGGCATCTCTAAGTACCGTGGGGTTGCTAGGCATCATCATAATGGTCGCTGGGAAGCTCGCATTGGAAGAGTATGTGGAAACAAGTACCTCTACTTGGGAACATATAAAACTCAAGAGGAGGCAGCAGTGGCATATGACATGGCAGCAATTGAGTACCGTGGAGTCAATGCAGTGACCAATTTTGACATAAGCAACTACATGGACAAAATAAAGAAGAAAAATGACCAAACCCTACAACAACAACAAACAGAAGTACAAACAGAAACAGTTCCTAACTCCTCTGACTCTGAAGAAGCAGAAGTAGAACAACAACACACAACAACAATAACTACACCACCCCCATCTGAAAATCTGCACATGCTACCACAGGAACACCAAGTTCAATACACCCACCATGTCACTCCAAGGGATGAAGAATCATCATCACTGGTCACAATTATGGAGCATGTGCTTGAACAGGATCTGCCATGGAGCTTCATGTACACTGGCTTGTCTCAGTTTCAAGATCCAAACTTGGCTTTAAGCAAAGGTGATGATGACTTGGCAGGCATGTTTGATGGTGCAGGGTTTGAGGAAGACATTGATTTTCTGTTCAGCACACAACCTGGTGATCATGAGACTGAGAGTGATGTCAACAACATGAGTGCAGTTTTGGATAGTGTTGAGTGTGGAGACACAAATGGGGCTGGTGGAAGAAGCATGGTGTATCATCATGTGGATAATAATAATAAGCAGAAGAAGATGCTTTCATTTGCTTCTTCTTCTTCACCATCATCTACAACAACTACAGTTTCTTGTGACTATGCTCTAGATCTATGA | 1281 | 0.4317 | MKRSPASSCSSSTSSVGFEVHHPIEKRRPKHPRRNNLKSQKCKQNQTTTGGRRSSIYRGVTRHRWTGRFEAHLWDKSSWNNIQSKKGKQVYLGAYDTEESAARTYDLAALKYWGKDATLNFPIETYTKDLEEMDKVSREEYLASLRRQSSGFSRGISKYRGVARHHHNGRWEARIGRVCGNKYLYLGTYKTQEEAAVAYDMAAIEYRGVNAVTNFDISNYMDKIKKKNDQTLQQQQTEVQTETVPNSSDSEEAEVEQQHTTTITTPPPSENLHMLPQEHQVQYTHHVTPRDEESSSLVTIMEHVLEQDLPWSFMYTGLSQFQDPNLALSKGDDDLAGMFDGAGFEEDIDFLFSTQPGDHETESDVNNMSAVLDSVECGDTNGAGGRSMVYHHVDNNNKQKKMLSFASSSSPSSTTTTVSCDYALDL | 426 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma08g02094 | 426 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 1 | 415 | - | - | |
Gma08g02094 | 426 | MobiDBLite | consensus disorder prediction | 228 | 253 | - | - | |
Gma08g02094 | 426 | SUPERFAMILY | DNA-binding domain | 157 | 218 | IPR016177 | GO:0003677 | |
Gma08g02094 | 426 | ProSiteProfiles | AP2/ERF domain profile. | 56 | 122 | IPR001471 | GO:0003700|GO:0006355 | |
Gma08g02094 | 426 | SUPERFAMILY | DNA-binding domain | 55 | 124 | IPR016177 | GO:0003677 | |
Gma08g02094 | 426 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Gma08g02094 | 426 | PRINTS | Ethylene responsive element binding protein signature | 57 | 68 | IPR001471 | GO:0003700|GO:0006355 | |
Gma08g02094 | 426 | PRINTS | Ethylene responsive element binding protein signature | 198 | 218 | IPR001471 | GO:0003700|GO:0006355 | |
Gma08g02094 | 426 | Pfam | AP2 domain | 56 | 114 | IPR001471 | GO:0003700|GO:0006355 | |
Gma08g02094 | 426 | Pfam | AP2 domain | 157 | 208 | IPR001471 | GO:0003700|GO:0006355 | |
Gma08g02094 | 426 | MobiDBLite | consensus disorder prediction | 230 | 253 | - | - | |
Gma08g02094 | 426 | CDD | AP2 | 157 | 218 | IPR001471 | GO:0003700|GO:0006355 | |
Gma08g02094 | 426 | SMART | rav1_2 | 56 | 128 | IPR001471 | GO:0003700|GO:0006355 | |
Gma08g02094 | 426 | SMART | rav1_2 | 158 | 222 | IPR001471 | GO:0003700|GO:0006355 | |
Gma08g02094 | 426 | MobiDBLite | consensus disorder prediction | 39 | 54 | - | - | |
Gma08g02094 | 426 | Gene3D | AP2/ERF domain | 157 | 218 | IPR036955 | GO:0003700|GO:0006355 | |
Gma08g02094 | 426 | Gene3D | AP2/ERF domain | 56 | 124 | IPR036955 | GO:0003700|GO:0006355 | |
Gma08g02094 | 426 | MobiDBLite | consensus disorder prediction | 1 | 54 | - | - | |
Gma08g02094 | 426 | CDD | AP2 | 55 | 123 | IPR001471 | GO:0003700|GO:0006355 | |
Gma08g02094 | 426 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WRI1 | 1 | 415 | - | - | |
Gma08g02094 | 426 | ProSiteProfiles | AP2/ERF domain profile. | 158 | 216 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma08g02094 | Gma-Chr8 | 18865540 | 18870821 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma08g02094 | 131 | 234 | AP2-EREBP Transcription Factor Family | AT5G57390 | 33.036 | 5.88e-12 | 65.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-AP2 | Gma08g02094 | AP2 | 2.8e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma08g02094 | - | - | gmx:100789774 | 810.446 |