Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02091 ATGGATGTCGAGGCAGTAGATGAAGGGGAAAACAGTGATAGACCTGCTTCTGAAAATGTTGAAACTGAAAAAGGCCAGGAACAAAATATGACTGTAAACTTGGCTGAAAGAGAAGTAAATAATCAGAATGGTGATGCATATAGGAAGCCACAAGTGGGCATGCTGTTTGAATCTGAAGATGCTGCAAAATCATTTTTTGATGCATATGCAAGACATGTAGGATTTAGCACACATGTTGGTCAATTCAGTCGTGCTAAGCCTGATGGTCCAATTATAACTTGGGACTTTGCATGTTCCAGGGAGGTATTTAAAAGGAAGAACATAGTTAGTTGCAATGCAATGCTTAGAGTAGAGAGAAAAGATGGAAACTGGATAGTGACAAAATTTGTTGAGGACCATAACCATTCCCTTGCTTCCTCTAGAAAGGTGCAGAACCTTCAACCCGGTAGGCATTTTGTAGGTGCTGCAAGGAATGTTACAACAGAGACATTTGATGCCCGTAATGAATCCTATGTTTCCGTGAATGGAAATCATTTAGAACCAATTGGTTCAGTTAGGAGCTCCTCTCTAGCAGAAAAATGTCATCCAATGAGAAACATTGAGTCTCTTACCTATGCAAGATCTTCTCGAAAGAGGACCCttggaagagatgctcaaaatcttctgaattattttaagaagatgcagggagaaaaccctggcttctattatgcgatacagctagatgatgaaaatcgcatgaccaatgtattctgggctgatgcaaggtcaagaacagcgtataattactttggtgatgctgtaatttttgacaccatgtatagaccaaatcaataccaagtcccatttgctccatttacaggattcaatcaccacggccagatggttatatttggttgtgcattacttctagatgaatctgagtcctcctttacttggctattcaagacgtggctatctgctatgaatgatcgaccacctgtttccataaccacagaccaagatagagccatacaagcagctgttgctcatgtgtttccagaaactcgccactgtatttgtaagtggcacattttgagagaaggtcaagaaagattggctcatatttaccttgctcatccttcattctatggggatctatacagctgtatcaatttttctgagactaccgaggattttgaatcaacatggaagtctcttctggataaatatgatcttcagaaaaatgattggcttcaagcagtgtataatgctcgcaaacaatgggcccctgtttactttcatgatactttctttgctgcaattacttcaaaccatggggttagctccttttttgatggctatgtaaatcaacagacaaccatatctttattttttaggcagtatgaaagatctcttgaacattcattggaaaaagaaatagaagcagattatgagactgtttgtaacacacctgtactgaagactccatcaccaatggaacaacaggcagcaaatatgtacactaagaagatttttgcaaaatttcaggaggaactggtggaaacttttgcttatACTGCAAATAATGTTGAGGATGATGGTGTGATCAGTAAATACAGGGTTGCAAAATATGAATATGATCACAAGGCATACATGGTCACATTGAATATCTCTGAAATGAAGGCAAAttgcagctgccagatgtttgaatactcaggcattctttgtcgacatatattgactgtcttcactgttacaaatgttcttacccttccatcgcactacattttgaagcgatggacaacgaatgcaaaATCTGATATTAGAACTTATGAAAAAATAACAGATCCACTTGACATTGAAAATCTTACTGTACGTTTTAATAGTTTATGTCGAGAAGCCATTAAGCTTGCTGAAGAAGGGGCAATTGCTGTAGAGACTTATAATGCAACAATGAATGCTTTAAGAGAGGGTGCTAAAAGGGTAGGTATTATGAAGAAAAATGTTGCAAAAGTCACACCTCCAAACACTCATGGTAATGGAAGCTGCCTGGAAGACAATAGCAAGAAGAGACCTTCATCAATTTCTGATGTCATCCCATCATTATGGCCTTGGCAAGATTCAGTGCCACATCACTTCAATCTTAATGACCTTGGGCTTCCTGTTACTGATCTGAATACCCCCAGTATGGCTCCTGTTTCTATTCACCGAGATGGTGGCCCTCTAGATAACACTGTTGTCCTTACTTGTTTCAAGTCTATGACTTGGATGATCGAAAATAAGAATTCGAGCTCATCCAGTAAAATTGCAGTCATCAACATGAAGCTTCAAGATTATGGTAAGGGCCCTTTAGGAGAGACAGAAGTGCAATTTAGGGTGACAAGGGTCACTTTGGAGCCTATGTTGAGGTCTATGACTTACATCAATCAACAGCTAAATGCACCAGTCAATAGAGTTGCAATCATCAATCTGAGGCTCCAGGATACAAAGACAACTACTGGGCAAACAGAGGTGAAATTCCAAGTTTCTAGAGATACGCTGGGTTCCATGCTGAGATCTATGGCCTATATCCAGGAGCAGCTATAA 2568 0.2387 MDVEAVDEGENSDRPASENVETEKGQEQNMTVNLAEREVNNQNGDAYRKPQVGMLFESEDAAKSFFDAYARHVGFSTHVGQFSRAKPDGPIITWDFACSREVFKRKNIVSCNAMLRVERKDGNWIVTKFVEDHNHSLASSRKVQNLQPGRHFVGAARNVTTETFDARNESYVSVNGNHLEPIGSVRSSSLAEKCHPMRNIESLTYARSSRKRTLGRDAQNLLNYFKKMQGENPGFYYAIQLDDENRMTNVFWADARSRTAYNYFGDAVIFDTMYRPNQYQVPFAPFTGFNHHGQMVIFGCALLLDESESSFTWLFKTWLSAMNDRPPVSITTDQDRAIQAAVAHVFPETRHCICKWHILREGQERLAHIYLAHPSFYGDLYSCINFSETTEDFESTWKSLLDKYDLQKNDWLQAVYNARKQWAPVYFHDTFFAAITSNHGVSSFFDGYVNQQTTISLFFRQYERSLEHSLEKEIEADYETVCNTPVLKTPSPMEQQAANMYTKKIFAKFQEELVETFAYTANNVEDDGVISKYRVAKYEYDHKAYMVTLNISEMKANCSCQMFEYSGILCRHILTVFTVTNVLTLPSHYILKRWTTNAKSDIRTYEKITDPLDIENLTVRFNSLCREAIKLAEEGAIAVETYNATMNALREGAKRVGIMKKNVAKVTPPNTHGNGSCLEDNSKKRPSSISDVIPSLWPWQDSVPHHFNLNDLGLPVTDLNTPSMAPVSIHRDGGPLDNTVVLTCFKSMTWMIENKNSSSSSKIAVINMKLQDYGKGPLGETEVQFRVTRVTLEPMLRSMTYINQQLNAPVNRVAIINLRLQDTKTTTGQTEVKFQVSRDTLGSMLRSMAYIQEQL 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02091 855 Pfam MULE transposase domain 268 360 IPR018289 -
Gma08g02091 855 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 35 799 - -
Gma08g02091 855 ProSiteProfiles Zinc finger SWIM-type profile. 545 581 IPR007527 GO:0008270
Gma08g02091 855 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 799 IPR031052 GO:0006355
Gma08g02091 855 Pfam FAR1 DNA-binding domain 64 138 IPR004330 -
Gma08g02091 855 Pfam SWIM zinc finger 533 579 IPR007527 GO:0008270
Gma08g02091 855 SMART 26again6 556 583 IPR006564 GO:0008270
Gma08g02091 855 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02091 Gma-Chr8 18844760 18851320 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma08g02091 MULE 4.8e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02091 - - gmx:100789242 1730.69