Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02089 ATGGCCGAAGTCATGAACGTGCCTCCCGAATCCCTCGACAAAtccccttcctcctccgctccccctccgcctccgcCTCCGCCGCCGCATTACCCTCCCCGGCGAAGGGACCGGCGAGACGACAGGGATTTCGATCGCCCTCCCAACCGCCGCGGCGATTACTATGACCGGAACGCGTCGTCCCCGTCGTCACCGCGAGACAGAGACCCGCTGCCACCGCGAGACAGAGACCGAGACAGAGACAGTGACCTCAAGCGCCGCCGCAGCCCCAGCCCTCCCCACCGCGAACGGCGGCATTCTCCGCCTCGACGCTTGCCTCCGCCGTACAAGCGGTCGCGCAGGGGCAGTCCTCGCGGCGGGTACGGACCTGATGATAGCAGACATGGATATGATTATTATGGTGGTTATGAACGGGGAATGGGTGGAAGAGGTGGTTATGCAGATGAGAAGTCCTATGGCAGGTTTGGGCCACGTTCTTCAGGGGGGTATCAAAATGGGATTTCCGGTATAGAATCCAATCGTGGTTACGGAGACATGCCAAGTGGTGGTGCACAAAGAGAGGGGTTGATGTCTTATAAGCAGTTCATTCAGGAGCTTGAGGACGATATACTACCAGCTGAAGCGGAGCGTAGGTATCAAGAATACAAATCAGAGTATATCTCGACCCAAAAACGAGCTTATTTTAATGCTCATAAGGATGAGGAATGGTTGAAAGATAAATATCATCCAACAAATTTGGTTACAGTCATTGAAAGGAGGAATGAAAATGCTCGACAGCTAGCAAAGGATTTTTTGCTTGATTTACAGAGTGGAACATTAGAACTAAATCCTGGTTTAAATGCCTCTATAAGTAAATCAGGGCAAGCTAGTGAACCAAATTCGGAGGAGGAAGCAGACACTGGAGGTAAACGAAGAAGGCAGGGTAGGGGATCCAATAAAGAAAATGATTTCTCAGCTGCTCCAAAAGCTCATCCTATCAGTACTGAACCAAGACGGATACAAGCAGATGTTCAACAGGCTCAGGCCCTTGTTCGCAAGCTTGACACAGAAAAGGGGATTGAAGATAATATTTTATGCATCAGTGATCACAATAGAAATGATGATAAGGCTCACAGTGCATCTGTGGCTCCCATAGTAATTATACGAGGCCTAACATCTGTTAAGGGTTTAGAAGGTGATGAGCTTCTGGATACACTCGTTACCTATCTTTGGCAGATTCATGGTGTAGATTATTATGGCATGATTGAGACTAATGAAGCTAAGGGCTTTAGGCATGTGAGACCGGAAGGGACAGCGCATGAAGTAGTAGCAGGTAAATCAGGTTCTGAATGGGAAAAGAAACTTGACTTATTTTGGCAAGGAAGGCTGAATGGTCAGGATCCCTTGGAAGTAATGACTGCTAAGGAGAAGATAGATGCTGCAGCAATGGAAGTATTGGATCCATATGTTCGAAAAATTAGGGATGAAAAGTATGGATGGAAGTATGGTTGTGGAGCTATGGGCTGCACAAAGCTTTTTCATGCTACTGAATTTGTGCTCAAACATCTGAAGCTCAAACACCCAGAGCTTGTTGTGGAACAGACTTCCAAAGTACGAGAGGATCTCTATTTTCAAAATTACATGAATGATAAAGATGCTCCTGGTGGAATGCCCATCATGCAGCAACCTCAGAAGGGCAGGCCTTTAAAGCGAAGAGGTCTTGAGGGCCGATTGAGAGATGATCGTGGTAATCGACGAGACCATGACCAGAGTGACAGAATGAATGGAGATAGGCCTGATAATTCCCCATCCCATGAAGCCATGATGGGAAACCGTGATGAAACAATGTATGATTCATATGCAGGGCCAGGTGTACCGCCATTTGCCTCTGATATACCTCCTCCACCAGTGTTGATGCCTGTCCCTGGTGCTGGGCCTTTGGGACCCTTTGTTCCTGCTCCCCCAGAAGTTGCAATGCAGATGTTAAGAGATCAAGGAGGATCATCATACGATGCCTCTGGAAGAAAGATGCACTCTGGCCCTCCTATGGGTGGAGGATCATCAATAATTGCTGTTCCTCCAACTTTTAGACCAGATCCACGGCGAATGCGAAGCTATCAAGATCTGGATGCCCCAGAGGATGAGGTCACTGTGATAGACTATCGGAGTTTGTAG 2154 0.4731 MAEVMNVPPESLDKSPSSSAPPPPPPPPPHYPPRRRDRRDDRDFDRPPNRRGDYYDRNASSPSSPRDRDPLPPRDRDRDRDSDLKRRRSPSPPHRERRHSPPRRLPPPYKRSRRGSPRGGYGPDDSRHGYDYYGGYERGMGGRGGYADEKSYGRFGPRSSGGYQNGISGIESNRGYGDMPSGGAQREGLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRAYFNAHKDEEWLKDKYHPTNLVTVIERRNENARQLAKDFLLDLQSGTLELNPGLNASISKSGQASEPNSEEEADTGGKRRRQGRGSNKENDFSAAPKAHPISTEPRRIQADVQQAQALVRKLDTEKGIEDNILCISDHNRNDDKAHSASVAPIVIIRGLTSVKGLEGDELLDTLVTYLWQIHGVDYYGMIETNEAKGFRHVRPEGTAHEVVAGKSGSEWEKKLDLFWQGRLNGQDPLEVMTAKEKIDAAAMEVLDPYVRKIRDEKYGWKYGCGAMGCTKLFHATEFVLKHLKLKHPELVVEQTSKVREDLYFQNYMNDKDAPGGMPIMQQPQKGRPLKRRGLEGRLRDDRGNRRDHDQSDRMNGDRPDNSPSHEAMMGNRDETMYDSYAGPGVPPFASDIPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLRDQGGSSYDASGRKMHSGPPMGGGSSIIAVPPTFRPDPRRMRSYQDLDAPEDEVTVIDYRSL 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02089 717 MobiDBLite consensus disorder prediction 542 602 - -
Gma08g02089 717 Pfam SERRATE/Ars2, N-terminal domain 193 274 IPR021933 -
Gma08g02089 717 MobiDBLite consensus disorder prediction 279 333 - -
Gma08g02089 717 MobiDBLite consensus disorder prediction 91 111 - -
Gma08g02089 717 MobiDBLite consensus disorder prediction 561 593 - -
Gma08g02089 717 MobiDBLite consensus disorder prediction 658 703 - -
Gma08g02089 717 ProSitePatterns Zinc finger C2H2 type domain signature. 497 520 IPR013087 -
Gma08g02089 717 PANTHER ARSENITE-RESISTANCE PROTEIN 2 1 717 IPR039727 GO:0006397
Gma08g02089 717 MobiDBLite consensus disorder prediction 1 164 - -
Gma08g02089 717 MobiDBLite consensus disorder prediction 68 90 - -
Gma08g02089 717 MobiDBLite consensus disorder prediction 279 295 - -
Gma08g02089 717 MobiDBLite consensus disorder prediction 15 30 - -
Gma08g02089 717 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 1 717 - -
Gma08g02089 717 MobiDBLite consensus disorder prediction 31 53 - -
Gma08g02089 717 Pfam Arsenite-resistance protein 2 439 617 IPR007042 -
Gma08g02089 717 MobiDBLite consensus disorder prediction 296 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02089 Gma-Chr8 18833702 18841429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02089 47 717 C2H2 Transcription Factor Family AT2G27100 60.485 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02089 - - gmx:100788714 1195.26