Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02077 ATGCACCACAACCACAACCTTAACCTTGCAAGGTTGTGGATTGCTTTGCTTGCGGTCTCAACCACCGTAGTTCATTGCAAAACTGCCTCCCAAGATGTTTCAGCCCTTAATGTGATGTATACAAGCTTAAATTCCCCTTCAAAGCTGAGTGGCTGGAAATCAAGTGGAGGTGATCCGTGTGGCGACTCCTGGGAAGGAATCAAATGCTCAGGATCTTCTGTCACAGAAATAAATTTATCTGACCTGGGCCTTTCCGGATCAATGGGCTACCAGTTGTCCAGCTTAAAATCAGTTACCGACTTTGATTTGAGCAACAACAACTTCAAGGGTGATATACCATATCAACTTCCTCCAAATGCTCGTTATATAGATCTTTCTAAGAACGACTTCACTGGAAGTATACCTTATTCATTCTCTGAGATGGATGACCTCAACTACCTAAATCTTGCACATAATCAGCTCAAAAACCAGTTGGGCGATATGTTTGGGAAGCTCAGTAAACTCAAACAACTGGATGTATCATTCAATTCACTATCAGGAGACCTACCCCAGAGTCTCAAATCGCTCAAAAGCCTCGAGAAGTTGCACCTACAAAACAACCAATTCACTGGTTCAGTAAATGTCCTTGCCAGCCTTCCACTTGAAGATTTGAATGTTGAAAACAACAAATTTACTGGTTGGGTTCCTGAGGAGTTAAAGGAGATAAATAATTTGCAAACTGGAGGAAACTCTTGGTCAAGTGGACCAGCACCTCCTCCTCCTCCTGGTACTCCCCCTATCAAGCATTCCGAGAAAAAGAATGATAAATCTGTTATTAGTGGAATAGCTATAGCAGGCATAGCCTTTGGTGTACTAGCAGTAATTATAATTGTTGTTGCTCTTTCTAAGAGAAGATCATCAAAAACTTCTTCACATTTTATCGATGAAGACAGGAATAGCCAGCATAGATCTTTTACACCCCTTGCATCTCAGGAGTTATCAAAAGATTCGGGTCATGATGTCAGCAAAGACTACATAGGTAGATTTAAGTCAATGGATTCTACTTCGATTGACGTAAAGGCTTTGCAAAAATCTCCATCAGTTAGTGTTAGGTCATCAGTCTCCGATTGTGTGCAATCCTTTAATGACAACGAGTTTGCGAATCGTCTAAATTCTAAGAGAAGCACATCAATCCGTGTTACTACTTTTTCACATGCAGAGTTACAGTCTGCTACTGCTAATTTTGCTTCTGGTCGACTTCTTGGTGAAGGATCCATAGGATGTGTTTATCGGGCTAAATATGCTGATGGAAAGGTATTGGCTGTAAAAAAGATCAATCCTTCGCTTTTGCATGGTGGTCCTTCCGAGGAATTCTCTCAGATTGTTTCAAGGATCAGCAAACTTCACCACCCAAATATTGTTGAGCTTGTCGGTTATTGTTCGGAACCGGAGCACATGTTAATATATGATTATTTCAGAAATGGCTCCCTCCATGACTTTTTACACTTATCGGACGACTTCAGCAAACCCCTAACTTGGAACACCAGAGTCAGAATTGCATTGGGAGCAGCTCGGGCTGTTGAGTACCTACATGAAATTTGTTCGCCTCCTTTATTGCACAAGAATATTAAGTCTTCCAATATTTTGCTTGACACCGATCTGAATCCTCGTCTCTCAGACTATGGTTTGGAATCCTTCTACCAGCGTACTGGCCAAAATCTTGGGGCAGGATATAATGCACCAGAATGCACAAAACCTTCAGCCTATACCCAGAAGAGTGATGTATACAGTTTTGGAGTAGTGATGCTGGAACTTTTGACAGGTCGAATGCCTTTAGACAGTTCAAAGACAAAAGCAGAACAAAGCCTGGTTCGTTGGGCCACTCCACAGCTTCATGACATTAATGCGGTGGAAAAAATGGTGGACCCTGCCTTGCGGGGGCTTTACCCTCCTAAGTCACTCTTCCGATTTGCTGATATTGTCGCCCTCTGTGTTCAGTCTGAGCCTGAATTTCGGCCACCTGTGTCAGAGTTAGTTCAGGCTTTGGTGCGATTAGTTCAACGTTCAAGTATGACAATGAGGGAGGATTTTGAGTGA 2076 0.4249 MHHNHNLNLARLWIALLAVSTTVVHCKTASQDVSALNVMYTSLNSPSKLSGWKSSGGDPCGDSWEGIKCSGSSVTEINLSDLGLSGSMGYQLSSLKSVTDFDLSNNNFKGDIPYQLPPNARYIDLSKNDFTGSIPYSFSEMDDLNYLNLAHNQLKNQLGDMFGKLSKLKQLDVSFNSLSGDLPQSLKSLKSLEKLHLQNNQFTGSVNVLASLPLEDLNVENNKFTGWVPEELKEINNLQTGGNSWSSGPAPPPPPGTPPIKHSEKKNDKSVISGIAIAGIAFGVLAVIIIVVALSKRRSSKTSSHFIDEDRNSQHRSFTPLASQELSKDSGHDVSKDYIGRFKSMDSTSIDVKALQKSPSVSVRSSVSDCVQSFNDNEFANRLNSKRSTSIRVTTFSHAELQSATANFASGRLLGEGSIGCVYRAKYADGKVLAVKKINPSLLHGGPSEEFSQIVSRISKLHHPNIVELVGYCSEPEHMLIYDYFRNGSLHDFLHLSDDFSKPLTWNTRVRIALGAARAVEYLHEICSPPLLHKNIKSSNILLDTDLNPRLSDYGLESFYQRTGQNLGAGYNAPECTKPSAYTQKSDVYSFGVVMLELLTGRMPLDSSKTKAEQSLVRWATPQLHDINAVEKMVDPALRGLYPPKSLFRFADIVALCVQSEPEFRPPVSELVQALVRLVQRSSMTMREDFE 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02077 691 Pfam Protein tyrosine and serine/threonine kinase 411 675 IPR001245 GO:0004672|GO:0006468
Gma08g02077 691 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Gma08g02077 691 Gene3D Transferase(Phosphotransferase) domain 1 485 690 - -
Gma08g02077 691 SUPERFAMILY L domain-like 29 239 - -
Gma08g02077 691 SUPERFAMILY Protein kinase-like (PK-like) 387 675 IPR011009 -
Gma08g02077 691 ProSiteProfiles Protein kinase domain profile. 408 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02077 691 Pfam Leucine rich repeat 118 178 IPR001611 GO:0005515
Gma08g02077 691 Gene3D Ribonuclease Inhibitor 27 256 IPR032675 -
Gma08g02077 691 MobiDBLite consensus disorder prediction 302 330 - -
Gma08g02077 691 Gene3D Phosphorylase Kinase; domain 1 368 484 - -
Gma08g02077 691 MobiDBLite consensus disorder prediction 238 266 - -
Gma08g02077 691 PANTHER OS01G0253100 PROTEIN 20 690 IPR045271 GO:0004714|GO:0006468
Gma08g02077 691 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 5 20 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02077 Gma-Chr8 18626818 18633766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02077 9 690 Strubbelig Receptor Gene Family AT1G78980 61.426 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gma08g02077 PK_Tyr_Ser-Thr 1.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02077 - - gmx:100785529 1218.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02077 08 18626818 18633766 Gma08g02077 08 18626818 18633766 ECH
Gma07g00008 07 107594 123070 Gma08g02077 08 18626818 18633766 GST