Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02073 ATGGTGTGTCGTATGATCAGATATAGGACTGGATGTGGGGGCCTGAATTATGGGGAAGAGGTTCCGCTTTCTGGCTGTGACTGTGGACTGAGAAAAACGACGACGAATTGCGATTCTTCGCCGGCACCGCTAACAACCAAAGAAGGAGTTGCATGCAATGCTGCAAAGAGAATGAATAGCGACCGGGTTCAGGGGGTGACTTGCCCCAAGGAGGACAAGCTAAGAACCTTCCCCAACATGCGCACTAAACCTTACACCCCACTGATATTTCGTATTCTATTGGGTATCAATGTTCGTGTcCTCTTCATTCTTTTGCTCTTCGGCTTGGGAGCTATCTTTTACGTCGGAGCTTCTACTTCTCCAATCATCGTCTTTGTCATCTCTGTTTGTATTCTCAGCTTCCTTGTGGCCATATATCTTACAAAGTGGGTCCTCGCAAAAGATGAGGGCCCTCCTGAAATGGTTCAGATATCAGACGCTATACGAGACGGAGCTGAAGGATTTTTCAGGACCCAGTATGGGAGTATATCTAAGATGGCCATGTTGCTTGCACTTGTCATTCTTTGCATATATTTGTTTCGCAGTACAAATCCTCAACAGGAATCTTCTGGCCTGGGAAGGACAACTTCTGCATACATCACTGTAGCTTCTTTCCTTTTAGGTGCCCTTTGTTCGGGTGTTGCTGGATATGTAGGGATGTGGGTGTCAGTTCGTGCCAATGTCAGAGTCTCTAGTGCTGCAAGACGGTCTGCAAGAGAGGCATTGCAGATAGCTACTCGTGCAGGTGGTTTATCTGCTATCATTGTTGTTGGTATGGCTGTAATTGGTATAGCAGTCCTTTATGCCACATTTTATGTTTGGTTGGAAGTGGACTCGCCAGGTTCAATGAAGGTTACTGATTTGCCTCTTCTTCTAGTTGGATATGGATTTGGTGCCTCCTTTGTTGCACTATTTGCCCAGTTGGGTGGTGGAATATACACAAAGGCCGCTGATGTTGGAGCAGACCTTGTCGGAAAAGTAGAACAGGGAATACCTGAAGACGACCCTAGGAATCCTGCTGTTATTGCTGATCTGGTTGGTGACAATGTGGGAGATTGTGCTGCTCGAGGTGCTGATCTTTTTGAAAGTATTGCAGCTGAAATAATTAGTGCCATGATACTTGGTGGAACAATGGCACAACGCTGTAAAATTGCAGGCAAGTACTTGAATCCATCTGGCTTCATCTTGTTTCCTCTTGTTGTTCACTCATTCGATCTGATAGTTTCATCAGCTGGAATATTTTCTATCAGGGGTACACGTGAAACTGGAGTTATAGTTCCTGTGGAGGATCCAATGACAATTCTTCAGAAAGGATATTCTTTTACGATTGTTTTAGCTGTTCTGGCATTCGGTTTGTCTACCCGGTGGTTACTTTACACTGAGCAAGCACCTTCAGCATGGTTCAATTTTGCTTTGTGTGGGTTGATTGGTATTATCACTGCTTACATATTTGTCTGGATTGCCAAGTATTATACTGACTACAAGCATGAGCCTGTGCGCATATTAGCTCTTTCCAGTTCTACTGGCCATGGGACTAATATAATTGCAGGAGTCAGTTTGGGTCTGGAATCTACTGCTCTTCCTGTCCTTGTCATCAGTGTGTCAATTATCTCAGCTTTCTGGCTGGGCCACACCTGTGGACTAGTAGATGAAACAGGAAACCCAACTGGTGGCCTGTTTGGCACTGCTGTGGCAACAATGGGAATGCTTAGTACTGCTGCCTATATTCTTACCATGGATATGTTTGGCCCAATAGCTGATAATGCTGGAGGAATTGTAGAGATGAGTCAGCAGCCTGAAAGTGTCCGAGAGATAACTGATGTCCTTGATGCCGTAGGAAACACAACCAAAGCTACCACCAAAGGGTTTGCTATTGGTTCTGCTGCTCTTGCATCTTTCCTTTTGTTTAGTGCTTATATGGATGAGGTTTCTTCATTTGCTCATGAACCTTTTAAACAGGTTGATATTGCAATTCCCGAAGTTTTCGTTGGTGGGTTGCTAGGTTCCATGCTTATATTTGTTTTTAGTGCTTGGGCCTGTTCTGCTGTTGGCAGAACTGCACAAGAAGTTGTTAACGAAGTGAGAAGGCAGTTCATTGAGAGGCCTGGTATAATGGATTACAAGGAGAAACCAGATTATGGTCGCTGTGTTGCTATTGTAGCATCTGCTTCGTTAAGAGAGATGATAAAACCTGGTGCTTTGGCAATCATTTCACCTATTTTAGTGGGTATTGTGTTCCGTATTTTGGGCTACTATACAGGGCAACCTTTACTTGGGGCTAAAGTTGTGGCTGCTTTGCTCATGTTTGCAACAGTGACTGGTATTCTTATGGCACTTTTTCTGAACACAGCTGGTGGTGCCTGGGATAATGCAAAGAAGTACATTGAGACTGGAGCTCTTGGAGGCAAGGGAAGTGAGGCTCACAAAGCAGCCATAACTGGAGATACAGTGGGAGACCCATTCAAAGACACAGCTGGGCCTTCAATCCATGTCCTTATAAAGATGCTTGCAACGATTACACTAGTAATGGCTCCAGTCTTCCTAAGCAGCGCTTTCTTTTGCTTTCAAATAAATTGCTCCGATTCAAAGCAAGGTCGTGGTTTTGGAGAAAACACTAACAGTAACAGTAACAGTAACAGGATTAAGACCAACAAATCTGACAAGGGATCAACAACTAAACAGTCTCGCCCTCTATCTTCTCAGGCACCCCGTTTAAGTTCACAACTTGACGGCAAATCTAGGAACGACTTTTTGGATGTTGACTTTGAGGAACGGCTAAAAGCAGTTAGAAGGTCAGCACTTGAGCAGAAGAAGGCAGAGGAGGAAAAAGAATTTGGAGCAATTGACTATGGTGCACCAATTCCTTCCGACAATAAGACAATTGGCCTTGGTACTAAGATTGGAGTAGGGGTAGCTGTTGCAGTCTTCGGTCTGGTTTTTGCTTTTGGTGATTTTCTTCCATCAGGAAGTGTTAGTCCCACTGAAGACAGTGCTGTGGTCAATAGTAAGTTGTCTGAGGAGGATAAAGCTACTCTTCAGAGTAGGCTCAAGGAGTTTGAAGCAACATTAAGTAATTCCCCAAGAGATCAAATTGCTCTTGAAGGAGCTGCAGTAACTTTGGCTGAACTAGGGGAATATGCAAGAGCTTCTTCTCTACTTGATGATTTGACAAAGGAAAAACCAAATGATGCTGATGTTTTTCGTTTGCTTGGAGAAGTTAAGTACGAACTCAAAGATTATGAAGGGAGTGTTGCCGCATATAAAAGCTCAGCAAGGGTGTCCAAAGATATCCAATTTGAAGTTCTCCGTGGCCTTTCCAATTCATTACTTGCTGCCAAAAAGCAAGAGGAGGCTGTTCAATTACTTTTGGCCTATCGTGAGCATCTGAGTTCAGAAAACTTGAGCAAAAATTCTGATAGCAACCCAACAGACTCACAAAAGCTGGATCCAGTCCAAGTTGAATTACTTCTAGGGAAAGCCTACTCAGATTGGGGCCATGTCAGTGATGCTGTAACTGTTTATGATCAGCTCATATCTACTCACCCTAATGATTTTCGTGGATACTTAGCTAAGGGAATCATCCTAAAAGAAAACAAAAATATTGGTGATGCAGAAAGGATGTTCATACAAGCTAGGTTCTTTGCACCAGATAGAGCCAAAGCACTTGTGGACCGTTATTCAAGATGA 3726 0.4377 MVCRMIRYRTGCGGLNYGEEVPLSGCDCGLRKTTTNCDSSPAPLTTKEGVACNAAKRMNSDRVQGVTCPKEDKLRTFPNMRTKPYTPLIFRILLGINVRVLFILLLFGLGAIFYVGASTSPIIVFVISVCILSFLVAIYLTKWVLAKDEGPPEMVQISDAIRDGAEGFFRTQYGSISKMAMLLALVILCIYLFRSTNPQQESSGLGRTTSAYITVASFLLGALCSGVAGYVGMWVSVRANVRVSSAARRSAREALQIATRAGGLSAIIVVGMAVIGIAVLYATFYVWLEVDSPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRCKIAGKYLNPSGFILFPLVVHSFDLIVSSAGIFSIRGTRETGVIVPVEDPMTILQKGYSFTIVLAVLAFGLSTRWLLYTEQAPSAWFNFALCGLIGIITAYIFVWIAKYYTDYKHEPVRILALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIISAFWLGHTCGLVDETGNPTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSSFAHEPFKQVDIAIPEVFVGGLLGSMLIFVFSAWACSAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYGRCVAIVASASLREMIKPGALAIISPILVGIVFRILGYYTGQPLLGAKVVAALLMFATVTGILMALFLNTAGGAWDNAKKYIETGALGGKGSEAHKAAITGDTVGDPFKDTAGPSIHVLIKMLATITLVMAPVFLSSAFFCFQINCSDSKQGRGFGENTNSNSNSNRIKTNKSDKGSTTKQSRPLSSQAPRLSSQLDGKSRNDFLDVDFEERLKAVRRSALEQKKAEEEKEFGAIDYGAPIPSDNKTIGLGTKIGVGVAVAVFGLVFAFGDFLPSGSVSPTEDSAVVNSKLSEEDKATLQSRLKEFEATLSNSPRDQIALEGAAVTLAELGEYARASSLLDDLTKEKPNDADVFRLLGEVKYELKDYEGSVAAYKSSARVSKDIQFEVLRGLSNSLLAAKKQEEAVQLLLAYREHLSSENLSKNSDSNPTDSQKLDPVQVELLLGKAYSDWGHVSDAVTVYDQLISTHPNDFRGYLAKGIILKENKNIGDAERMFIQARFFAPDRAKALVDRYSR 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02073 1241 SUPERFAMILY TPR-like 1029 1234 IPR011990 GO:0005515
Gma08g02073 1241 Coils Coil 936 956 - -
Gma08g02073 1241 Pfam Inorganic H+ pyrophosphatase 131 856 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gma08g02073 1241 Gene3D Tetratricopeptide repeat domain 1014 1239 IPR011990 GO:0005515
Gma08g02073 1241 SMART tpr_5 1077 1110 IPR019734 GO:0005515
Gma08g02073 1241 SMART tpr_5 1164 1197 IPR019734 GO:0005515
Gma08g02073 1241 SMART tpr_5 1198 1231 IPR019734 GO:0005515
Gma08g02073 1241 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 120 861 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gma08g02073 1241 MobiDBLite consensus disorder prediction 878 925 - -
Gma08g02073 1241 PANTHER INORGANIC DIPHOSPHATASE-RELATED 75 861 - -
Gma08g02073 1241 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 75 861 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gma08g02073 1241 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 125 862 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gma08g02073 1241 ProSiteProfiles TPR repeat profile. 1164 1197 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02073 Gma-Chr8 18575692 18594304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02073 58 861 Primary Pumps ATPases AT1G16780 85.821 0.0 1419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02073 K23025 - gmx:100784465 1464.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00013 07 149231 156931 Gma08g02073 08 18575692 18594304 GST