Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02071 ATGAAACTGGCTACCCCTAAAATAATTAGAAAGATCCCAAGCCCTCTGAAGTTGGTATCCAGAAGCTCAAGTTCAGCAGCAAAGAAGCCACTATTGGTGTCAGGATCAGGACAACCGTCGTCGTCGTCGGATGGAAGTAGCAAGCAACAGGTGGTTCCCAAAGGGTCCCTGGCTGTTTACGTGGGTCCCGACCTTCGAAGGTTTGTCATTCCAGTAAGCTTCTTGGCCATGCCAGACTTCAAGGTTTTGATGGAGTCGGTGGCAGAGGAATATGGCTGCGATCACGATGGCGCTATTCAAATCCCCTGCGATGAAGACTATTTTCAGCAAATCTTGATGTCTTGTTCCCAAAGACAACGGATCATATCCCCTAAGAAACTAATTCCTAACATCCCACTCATATGTACTACTCATTAA 417 0.4676 MKLATPKIIRKIPSPLKLVSRSSSSAAKKPLLVSGSGQPSSSSDGSSKQQVVPKGSLAVYVGPDLRRFVIPVSFLAMPDFKVLMESVAEEYGCDHDGAIQIPCDEDYFQQILMSCSQRQRIISPKKLIPNIPLICTTH 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02071 138 PANTHER OS02G0143300 PROTEIN 37 119 - -
Gma08g02071 138 MobiDBLite consensus disorder prediction 17 52 - -
Gma08g02071 138 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 37 119 IPR003676 GO:0009733
Gma08g02071 138 Pfam Auxin responsive protein 36 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02071 Gma-Chr8 18569543 18569959 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02071 52 112 Calmodulin-binding Proteins AT3G43120 60.656 1.89e-22 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02071 K14488 - gmx:102663803 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02071 08 18569543 18569959 Gma08g02071 08 18569543 18569959 ECH