Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02070 ATGGATTCAAAGAAGTGTAACAAGATCAGAGAAGTTGTTAGGCTTCAACAAATCCTCAAGAAATGGAAGAAAGTTGCAACTGCTTCCAACAACAACAACAACAGCTCCAGCAGTAAAGGCATCAAGTTTTTGAAGCGAACCCTTTCATTCACAGATGTTTCTTCCACCAACACCAATCAAGACATCGTTCCAAAAGGGTTCCTTGCTGTTTGTGTAGGGAAAGAGCTCAAGAGATTCATTATTCCCACGGATTACTTGAGACACCAAGCTTTTGAGATGTTGCTCCAAGAAGCAGAAGAGGAATTTGGTTTCCAGCAAGAGGGTGTCCTCAAAATCCCATGCCAAGTATCAGTCTTCGAGAAAATATTGAATGCCGTGGAAGACAACAAACAACCCTTGGATGAGTTTGGCTTCAATGCGTCTGATTGTGAAGTCACTTCCCCTCATCATGCTCAACCGTGTACATAG 468 0.4252 MDSKKCNKIREVVRLQQILKKWKKVATASNNNNNSSSSKGIKFLKRTLSFTDVSSTNTNQDIVPKGFLAVCVGKELKRFIIPTDYLRHQAFEMLLQEAEEEFGFQQEGVLKIPCQVSVFEKILNAVEDNKQPLDEFGFNASDCEVTSPHHAQPCT 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02070 155 PANTHER OSJNBA0060N03.10 PROTEIN 5 148 - -
Gma08g02070 155 Pfam Auxin responsive protein 20 125 IPR003676 GO:0009733
Gma08g02070 155 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 148 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02070 Gma-Chr8 18568222 18568778 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02070 1 154 Calmodulin-binding Proteins AT2G24400 54.706 2.69e-53 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02070 K14488 - gmx:100782489 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02070 08 18568222 18568778 Gma08g02070 08 18568222 18568778 ECH
Gma07g00015 07 169342 169770 Gma08g02070 08 18568222 18568778 GST