Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02058 ATGGAAAAGAAGAAGTACCCCATCGGGGAGGAGCATTACCTTCTCTACGAGGAGATTGGCCAGGGGGTCAGTGCCTCTGTCCACCGCGCTCTCTGCCTCCCCTTCAACGAGGTCGTCGCCATCAAAATCCTCGACTTCGAACGTGACAACTGCGATCTGAACAACGTTTCTCGCGAGGCCCAGACAATGATCCTGGTGGACCACCCCAACGTCCTCAAATCCCACTGCTCCTTCGTCAGCGATCACAATCTCTGGGTTGTCATGCCCTTCATGTCCGGCGGTTCATGCCTCCACATACTCAAAGCCGCCCACCCCGACGGTTTCGAGGAGGTGGTCATTGCTACCGTTCTCAAAGAGGTCTTGAAGGGTTTGGAGTACCTTCACCATCACGGCCACATCCACCGCGACGTCAAGGCCGGCAACATTCTCATCGATTCACGCGGGGCCGTCAAGCTCGGCGACTTTGGTGTCTCTGCCTGCCTCTTCGATTCCGGTGACCGCCAACGCACAAGGAATACATTTGTAGGAACACCTTGCTGGATGGCACCTGAGGTCATGGAGCAACTTCACGGCTACAATTTCAAAGCTGACATCTGGTCGTTTGGTATAACCGCCTTGGAGCTTGCACATGGCCATGCCCCTTTCTCAAAGTTTCCACCAATGAAGGTACTGCTCATGACTCTCCAAAATGCACCCCCTGGCCTTGACTACGAAAGGGATAGGAAGTTCAGTAAGTCTTTTAAGCAGATGATTGCTAGTTGCTTGGTAAAAGATCCTTCAAAACGACCCTCTGCAAGCAAGTTGTTAAAACATTCCTTCTTTAAGCAGGCTCGCTCCAGTGATACTATAGTCAAAAAACTTTTGGAGGGGTTGCCTGCTTTAGGTGACCGAATGGAAGCTCTAAAGAGAAAAGAAGAAGATATGCTCGCACAAAAGAAAATGCCTGATGGAAAGATGGAGGAATTATCACAGAACGAATACAAACGAGGAATTAGTGGTTGGAACTTCAATCTTGACGACATGAAGGCTCAGGCTTCCTTGATCCACGATTTCGACGATGCTATGTCCGATATCAACCATGCAGGAAGTTCAAGTTCTTTATCTACACTTGATTCACTAGATAAGCAATTGCCAAGTGCAATTCACAAACCTTCTCGATCTGCTGATATGGAAGAGAATGATGAGATGCGACGTCAATTAGCTTCTGCTCTCCTAGTTGATTCTGCAGTAAACGATGCCAAAACTAGGTTCGAAAAATCCGATGATGACTCTAGCATCGCCAGTTCAAGCCATGAACCACAAACTTCTTCATCCTGTCCAGATGATCATGTGAACAATCATTTGGGTGAAAAATCTGATATGGAAAATGGTGGAAGATCCGTGGAGGGAATGGCTACCCATTATTATCATAGAAGAGGATGTTCATCCAGCATCTTACCTGAAGCTACTCTTCTTCCTATTCGGGCAGAAAGTGAGAAACCACAAAATCTGCCCCACAACGTTTCAAGTTGCAATGCAACTTCAGTTCCACAGACAGGAGAGGACGTGCTTACCGAACTTCCTTCTAGAGTCTCAAAATCATCAGCTAATTCTGATGACACTGATGAGAAATCAAAGGTGCCAGTTGTACAGCAGAGAGGGCGTTTTAAGGTTACATCTGAGAATGTTGACCCAGAAAAGGTGGCCCCTTCTCCTCTATTGCAAAAGAGCCATAGCATGCAGGTTTTTAGCCAGCATAATACTGCTTCTATACATCCTACTTTGCCATTACTACCGGCATCTGATGCCACATCATCAAATCTTTCTGGCTACTCTCTGTTTCCTGTGTTACACTCTGTACTGCAGACAAATATTCTTCAAAGGGAGGGCATTTTAAGTTTAATGAAGCAAATTACTGTCGGTGACTCTTCAGCTGATGGCACATGCAACCCAGCACAGGTAGCAGCAACAGAGAAATCTTTGCTTGAAGCAGCTCACGAGAGGGAAAAGGAGTTACTTCATGAGATAACAGATTTGCAGTGGAGGCTTATCTGTACCCAGGAGGAGCTTCAAAAGTTGAAAACAGAAAACGCCCAGAAGTGA 2082 0.4683 MEKKKYPIGEEHYLLYEEIGQGVSASVHRALCLPFNEVVAIKILDFERDNCDLNNVSREAQTMILVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAHPDGFEEVVIATVLKEVLKGLEYLHHHGHIHRDVKAGNILIDSRGAVKLGDFGVSACLFDSGDRQRTRNTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKFPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSASKLLKHSFFKQARSSDTIVKKLLEGLPALGDRMEALKRKEEDMLAQKKMPDGKMEELSQNEYKRGISGWNFNLDDMKAQASLIHDFDDAMSDINHAGSSSSLSTLDSLDKQLPSAIHKPSRSADMEENDEMRRQLASALLVDSAVNDAKTRFEKSDDDSSIASSSHEPQTSSSCPDDHVNNHLGEKSDMENGGRSVEGMATHYYHRRGCSSSILPEATLLPIRAESEKPQNLPHNVSSCNATSVPQTGEDVLTELPSRVSKSSANSDDTDEKSKVPVVQQRGRFKVTSENVDPEKVAPSPLLQKSHSMQVFSQHNTASIHPTLPLLPASDATSSNLSGYSLFPVLHSVLQTNILQREGILSLMKQITVGDSSADGTCNPAQVAATEKSLLEAAHEREKELLHEITDLQWRLICTQEELQKLKTENAQK 693
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02058 693 Gene3D Transferase(Phosphotransferase) domain 1 94 327 - -
Gma08g02058 693 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Gma08g02058 693 SMART serkin_6 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02058 693 Coils Coil 669 693 - -
Gma08g02058 693 MobiDBLite consensus disorder prediction 495 515 - -
Gma08g02058 693 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Gma08g02058 693 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 692 - -
Gma08g02058 693 MobiDBLite consensus disorder prediction 427 443 - -
Gma08g02058 693 MobiDBLite consensus disorder prediction 493 541 - -
Gma08g02058 693 CDD STKc_OSR1_SPAK 11 274 - -
Gma08g02058 693 Pfam Protein kinase domain 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02058 693 MobiDBLite consensus disorder prediction 416 460 - -
Gma08g02058 693 ProSiteProfiles Protein kinase domain profile. 13 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g02058 693 SUPERFAMILY Protein kinase-like (PK-like) 11 275 IPR011009 -
Gma08g02058 693 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 692 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma08g02058 Gma-Chr8 18467870 18474549 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02058 1 675 MAP Kinase Kinase Kinase Kinase AT1G79640 65.598 0.0 883
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gma08g02058 Pkinase 1.4e-58 CL0016
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02058 08 18467870 18474549 Gma08g02058 08 18467870 18474549 ECH
Gma07g00026 07 230700 237460 Gma08g02058 08 18467870 18474549 GST