Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02043 ATGAACGGCCACCATACGGTTAACATCGCTAACATTAACAGGCACCCCAACGAAGATGACGACAATGCCCACCCTCCCTCCTCCGACAACAACCACCATGATGATGACGAAGAAGAACTCGTTGATCCCGATGATCCTTTTGACATTACTCAAACCAAGAACGCATCGCACGACACGCTTCGCCGTTGGAGACAAGCAGCACTCGTGCTCAATGCGTCCAGGCGTTTTAGATATACTTTGGACTTGAGAAAGGAAGAAGAGAAAGAGCAAAAGAAACACTTGATTAGAGCCCATGCACAAGTCATAAGAGCAGCACTGCTTTTCAGATTGGCCGGTGAACGTGAACTAGTGATAAGTACAGCAGCGTCACCCCCAACTCCAGCCGGTGACTATGATATTGGGCTCGAACAACTTGTTTCAATGGCTAAGGATCAGAATATTTCTGCTTTACAACAATATGGAGGGGCAAGTCTACAACATATTAGAGGCTTATCAAATTTAATAAAATCTAATCCGGATAAAGGTGTTAGTGGAGATGATGCTGATCTGTTAAAAAGGAAAAATGCATTTGGAACTAATACATATCCTCGGAAAAAAGGAAGAAGTTTCTGGAGGTTTTTATGGGAAGCTTGGCAAGATCTGACTCTCATAATACTGATAATAGCTGCTGCGGTGTCATTGGCACTTGGAATAAAAACAGAGGGTTTGGCTGAAGGATGGTATGATGGGGGAAGCATTGCTTTTGCAGTTCTTCTTGTCATTGTAGTTACAGCTGTCAGTGATTATCGGCAATCTCTGCAGTTTCAGAATTTGAATGCAGAAAAACAAAATATACAATTGGAGGTTATTAGAGGTGGGAGAACAATTAAAATTTCAATATTTGATATTGTTGTTGGTGATGTTATACCCCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAGTATTAATCACGGGCCATTCACTTGCAATTGATGAATCCAGTATGACTGGTGAAAGCAAGATTGTTCATAAGGATCACAAAACACCATTTTTTATGTCTGGTTGCAAAGTAGCAGATGGAGTTGGTCTTATGCTGGTAACTGGTGTTGGTATAAATACCGAATGGGGATTGTTGATGGCTAGTATCTCAGAGGACAATGGAGAAGAGACTCCATTACAGGTACGCTTGAATGGAGTAGCAACTTTTATTGGTGTAGTTGGGCTTAGTGTAGCTGTTTTAGTGCTTGCTGTCCTCTTGGGCAGATACTTTTCCGGCCATACCAAAGATTTAGATGGAAATGTTGAATTTGTTGCCGGAAAGACTAGTCTTAGCAATGCAGTAGATGGGGTCATCAAAATTTTTACCATTGCAGTCACAATTGTGGTTGTTGCAGTGCCTGAAGGTCTACCTTTGGCTGTTACCTTAACCTTGGCATACTCAATGCGGAAAATGATGGCAGACAAGGCCTTGGTACGGCGGCTATCAGCCTGTGAAACTATGGGCTCTGCCACAACAATTTGCAGTGATAAGACAGGAACATTGACCTTAAATCAGGCGATTGAGGCATATGTTGGGAGCACAAAAGTAAATCCACCGGATGACTCATCAAAGTTGCATCCAAAAGCATTGTCTCTGATAAATGAGGGCATTGCACAGAATACAACCGGAAATGTTTTTGTACCCAAGGATGGTGGAGAAACAGAGGTATCCGGATCTCCTACAGAGAAGGCTATTCTTTCATGGGCAGTCAAGTTGGGTATGAATTTTGATGTTATAAGATCAAATTCAACAGTTCTCCATGTCTTCCCCTTCAATTCTGAGAAAAAGCGAGGTGGTGTTGCTTTGAAGCTGGGGGATTCTGGAATACATATACATTGGAAGGGAGCCGCAGAGATAGTTCTAGGAACATGTACTCAATATCTTGATTCAGATGGTCAATTGCAATCCATTGAAGAAGATAAGAAGGCTTTTTTCAAGGATGCTATTGATGACATGGCTGCTCGCAGCTTGCGTTGTGTAGCCATTGCATACAGATCCTATGAACTAGACAAAGTTCCATCTAGTGAGCAGGATTTAGACCAATGGTCCTTACCGGAATATGAGCTTGTTTTGCTTGCTATTGTTGGAATAAAGGATCCTTGTCGCCCTGGTGTCAAAGATGCTGTAAAAGTATGCACTGATGCTGGTGTTAAGGTACGCATGGTTACTGGAGACAACCTTCAAACAGCAAAGGCAATAGCTTTGGAGTGTGGCATACTGGCTTCAATTGAAGATGCTGTTGAGCCGAATATAATTGAAGGAAAGAAATTCCGTGAACTATCTGAAAAGGAAAGAGAAGATATTGCCAAGAAAATAACTGTGATGGGGAGGTCTTCTCCTAATGACAAGCTTTTGCTTGTGCAAGCTCTACGTAAAGGAGGGGAAGTTGTTGCGGTCACAGGAGATGGCACCAATGATGCTCCTGCCCTACATGAGGCAGATATTGGTCTTTCTATGGGCATCTCCGGAACTGAAGTTGCAAAAGAAAGCTCAGATATTATAATCCTAGACGACAACTTTGCATCAGTAGTAAAGGTTGTCCGCTGGGGCCGCTCTGTATATGCAAATATTCAGAAATTTATCCAGTTCCAGCTTACAGTTAATGTTGCTGCTCTTGTAATAAATGTTGTGGCAGCAATAACTTCTGGTGATGTTCCTTTAAATGCAGTGCAGCTTTTGTGGGTTAACCTTATCATGGATACACTTGGGGCGCTTGCACTGGCTACTGAACCACCAACAGACCGCCTAATGCACAGATCACCAGTTGGCCGAAGAGAACCTCTTATAACAAATATCATGTGGAGAAACTTGATCGTACAGGCTGCCTATCAAATCGCAGTTCTCCTCGTCCTTAACTTTTGTGGTGAAAGTATTCTACCAAAACAAAATACCAGAGCTGATGCCTTTCAAGTGAAGAATACTTTAATATTCAACGCGTTCGTCCTGTGCCAAATATTCAATGAATTCAATGCTCGGAAACCCGATGAAATGAATGTTTTCCGTGGAGTGACCAAGAACAAACTTTTCGTGGGAATTGTTGGAGTGACCTTTATACTTCAGATAATCATCATCGAGTTCCTTGGAAAGTTCACCTCAACGGTGAGGCTTGATTGGAAGCTATGGCTTGCTTCTCTTGGTATTGGATTTGTCAGTTGGCCCCTTGCTATAGTCGGAAAATTTATTCCAGTTCCCAAAACACCATTGGCTCGTTACTTCTTGAAGCCACTCAGGCGATTGAAGAGGTCTAGGTCTCGTGCTACACAATAG 3288 0.4252 MNGHHTVNIANINRHPNEDDDNAHPPSSDNNHHDDDEEELVDPDDPFDITQTKNASHDTLRRWRQAALVLNASRRFRYTLDLRKEEEKEQKKHLIRAHAQVIRAALLFRLAGERELVISTAASPPTPAGDYDIGLEQLVSMAKDQNISALQQYGGASLQHIRGLSNLIKSNPDKGVSGDDADLLKRKNAFGTNTYPRKKGRSFWRFLWEAWQDLTLIILIIAAAVSLALGIKTEGLAEGWYDGGSIAFAVLLVIVVTAVSDYRQSLQFQNLNAEKQNIQLEVIRGGRTIKISIFDIVVGDVIPLKIGDQVPADGVLITGHSLAIDESSMTGESKIVHKDHKTPFFMSGCKVADGVGLMLVTGVGINTEWGLLMASISEDNGEETPLQVRLNGVATFIGVVGLSVAVLVLAVLLGRYFSGHTKDLDGNVEFVAGKTSLSNAVDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQAIEAYVGSTKVNPPDDSSKLHPKALSLINEGIAQNTTGNVFVPKDGGETEVSGSPTEKAILSWAVKLGMNFDVIRSNSTVLHVFPFNSEKKRGGVALKLGDSGIHIHWKGAAEIVLGTCTQYLDSDGQLQSIEEDKKAFFKDAIDDMAARSLRCVAIAYRSYELDKVPSSEQDLDQWSLPEYELVLLAIVGIKDPCRPGVKDAVKVCTDAGVKVRMVTGDNLQTAKAIALECGILASIEDAVEPNIIEGKKFRELSEKEREDIAKKITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGISGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAITSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDRLMHRSPVGRREPLITNIMWRNLIVQAAYQIAVLLVLNFCGESILPKQNTRADAFQVKNTLIFNAFVLCQIFNEFNARKPDEMNVFRGVTKNKLFVGIVGVTFILQIIIIEFLGKFTSTVRLDWKLWLASLGIGFVSWPLAIVGKFIPVPKTPLARYFLKPLRRLKRSRSRATQ 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02043 1095 Pfam Cation transporter/ATPase, N-terminus 162 226 IPR004014 -
Gma08g02043 1095 CDD P-type_ATPase_Ca_PMCA-like 183 940 - -
Gma08g02043 1095 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 521 704 IPR023299 GO:0000166
Gma08g02043 1095 SFLD p-type atpase 483 859 IPR044492 -
Gma08g02043 1095 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 157 1070 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Gma08g02043 1095 PRINTS Sodium/potassium-transporting ATPase signature 618 636 - -
Gma08g02043 1095 PRINTS Sodium/potassium-transporting ATPase signature 494 515 - -
Gma08g02043 1095 PRINTS Sodium/potassium-transporting ATPase signature 244 264 - -
Gma08g02043 1095 Gene3D - 55 109 - -
Gma08g02043 1095 MobiDBLite consensus disorder prediction 1 56 - -
Gma08g02043 1095 Gene3D - 182 377 - -
Gma08g02043 1095 Gene3D - 511 707 IPR023299 GO:0000166
Gma08g02043 1095 SMART Cation_ATPase_N_a_2 157 231 IPR004014 -
Gma08g02043 1095 SUPERFAMILY HAD-like 499 912 IPR036412 -
Gma08g02043 1095 PANTHER CATION TRANSPORTING ATPASE 44 1085 - -
Gma08g02043 1095 Pfam Ca2+-ATPase N terminal autoinhibitory domain 44 87 IPR024750 GO:0005516
Gma08g02043 1095 ProSitePatterns E1-E2 ATPases phosphorylation site. 503 509 IPR018303 -
Gma08g02043 1095 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 774 888 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma08g02043 1095 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 438 513 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma08g02043 1095 Pfam Cation transporting ATPase, C-terminus 892 1067 IPR006068 -
Gma08g02043 1095 SFLD C1.7: P-type atpase like 483 859 - -
Gma08g02043 1095 Gene3D - 498 852 IPR023214 -
Gma08g02043 1095 SUPERFAMILY Calcium ATPase, transduction domain A 279 374 IPR008250 -
Gma08g02043 1095 PRINTS P-type cation-transporting ATPase superfamily signature 722 732 - -
Gma08g02043 1095 PRINTS P-type cation-transporting ATPase superfamily signature 325 339 - -
Gma08g02043 1095 PRINTS P-type cation-transporting ATPase superfamily signature 501 515 - -
Gma08g02043 1095 PRINTS P-type cation-transporting ATPase superfamily signature 807 826 - -
Gma08g02043 1095 PRINTS P-type cation-transporting ATPase superfamily signature 700 711 - -
Gma08g02043 1095 PRINTS P-type cation-transporting ATPase superfamily signature 831 843 - -
Gma08g02043 1095 MobiDBLite consensus disorder prediction 14 34 - -
Gma08g02043 1095 Gene3D - 209 1059 - -
Gma08g02043 1095 SUPERFAMILY Calcium ATPase, transmembrane domain M 160 1070 IPR023298 -
Gma08g02043 1095 Pfam haloacid dehalogenase-like hydrolase 498 821 - -
Gma08g02043 1095 Pfam E1-E2 ATPase 278 479 - -
Gma08g02043 1095 PANTHER CALCIUM-TRANSPORTING ATPASE 44 1085 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02043 Gma-Chr8 18357114 18376471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02043 21 1091 Primary Pumps ATPases AT3G21180 76.723 0.0 1656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02043 K01537 - gmx:100777143 2004.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02043 08 18357114 18376471 Gma08g02043 08 18357114 18376471 ECH