Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02013 ATGTCTCTAAAAATAGCAGCAGAAGTTTATCCAAAATCACCATCAGAGACAGGGATGGAGCCTTTGGTGTTAGTAAAGGAATATGAAGAAGATAGACACAAGGTGGCAGTAGAGAAACTTGAGAGGCTTTGTGAAGTTGGGCAGAGTGGAAAGCCTTCTCTTGTCACTGACCTCATGGGAGACCCCATATGCCGTATCCGTCACTTTCAATTGCATGCCATGCTAGTTGCAGAATATGGAGAAGAAGGAGAAGTTGTTGGGGTGATAAGGGGGTGTGTAAAAACAGTTACAAGAGGGAATTCGGTTTATGTAGAACTAGCCTATATCTTGGGGCTCAGAGTCTCCCCTCGGCACAGGAGATTTGGCATTGGCACAAAACTAGTTGAACATTTAGAAGAGTGGTGCAAGCAAAAAGGGTCTAAGTATGCATATATGGCAACTGATTGTACCAATGAACCATCCGTGAATTTGTTCACAAAAAAATGTGGTTACTCAAAGTTCAGGACTCTAACCATACTAGTGCAACCTGTGCATGCTCACTACAAGCCAATTAGCTCCAATGTTGCTGTGCTTCGCCTTCCGCCACGCCTAGCCGGGTCCATGTATAACCATATGTTTGCCAATTCAGAATTTTACCCTAAGGACATAGAGTTAATCTTGTCAAACAAGCTGAATTTGGGAACTTTCATGGCCATCCCAAAGAAGTACTTATCGAAATGTGATCCAAAAAGGGGCATTCTGCCTCCAAGCTATGCAATATTGAGTGTGTGGAACACCAAAGATGTGTTCAAGTTGCAAGTGAAGGGTGTGTCACCATGGGCACATGCTTGTTGCGTAGGTACAAGGTTGTTGGATGAATGGATGCCATGGCTAAGGCTACCTTCATTTCCTGATGTTTTTAGGCCATTTGGGGTTTATTTTCTCTATGGACTACACATGGAGGGAAAGTGTGGTGCACAACTAATGAAGTCCCTGTGTGGATTTGTGCACAACATGGCTAGAGATGATGGTGGTTGTGGGGCCATTGTGGCTGAACTGGGCCAAAGGGACCCAGTTAGAGACGCAGTCCCACATTGGAGAAAGTTCTCATGGGCAGAGGACATGTGGTGCATTAAGAATCTTGAGGACACTAAGAAGGATATCCAAGAATCTGATTGGTTCACTTCTAGATCCTCTTCGCCAGTGATATTTGTTGATCCTCGAGATTTTTGA 1212 0.4431 MSLKIAAEVYPKSPSETGMEPLVLVKEYEEDRHKVAVEKLERLCEVGQSGKPSLVTDLMGDPICRIRHFQLHAMLVAEYGEEGEVVGVIRGCVKTVTRGNSVYVELAYILGLRVSPRHRRFGIGTKLVEHLEEWCKQKGSKYAYMATDCTNEPSVNLFTKKCGYSKFRTLTILVQPVHAHYKPISSNVAVLRLPPRLAGSMYNHMFANSEFYPKDIELILSNKLNLGTFMAIPKKYLSKCDPKRGILPPSYAILSVWNTKDVFKLQVKGVSPWAHACCVGTRLLDEWMPWLRLPSFPDVFRPFGVYFLYGLHMEGKCGAQLMKSLCGFVHNMARDDGGCGAIVAELGQRDPVRDAVPHWRKFSWAEDMWCIKNLEDTKKDIQESDWFTSRSSSPVIFVDPRDF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02013 403 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 72 171 IPR016181 -
Gma08g02013 403 CDD NAT_SF 74 144 - -
Gma08g02013 403 PANTHER OS12G0561600 PROTEIN 1 403 - -
Gma08g02013 403 Gene3D - 24 169 - -
Gma08g02013 403 Pfam Acetyltransferase (GNAT) family 73 164 IPR000182 GO:0016407
Gma08g02013 403 PANTHER N-ACETYLTRANSFERASE 1 403 - -
Gma08g02013 403 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 194 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02013 Gma-Chr8 18132428 18134766 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gma08g02013 Acetyltransf_1 4e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02013 - - gmx:100802670 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g02013 08 18132428 18134766 Gma08g02013 08 18132428 18134766 ECH
Gma07g00217 07 1778721 1780930 Gma08g02013 08 18132428 18134766 GST