Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02008 ATGGGCCAGCTTTACTTTAGACACTCTCTCTTGATCATTCTCTCTCAGTGCTCTCGATCTGCACTGCAACTTCCTTGTCTGACAGATCCCGTGTTCCGGAGAAAGGAAAAGGCAAGAAAGATGTCGGGGCAAACGCAGCGTCTGAACGTGGTCCCCACCGTGACGATGCTGGGAGTGGTCAAGGCGCGTCTAGTCGGCGCCACGCGCGGTCACGCGCTCCTGAAGAAGAAGAGCGACGCGCTCACGGTGCAGTTCCGCCAGATCCTGAAGAAGATCGTGTCCACGAAAGAATCTATGGGCGACATCATGAAAACGTCGTCGTTCGCGCTCACCGAGGCAAAATACGTCGCCGGCGACAACATCAAGCACGTCGTCCTCGAAAACGTGAAAGAAGCCTCCCTCCGCGTCCGGTCGCGCCAGGAGAACGTCGCCGGAGTGAAACTCCCGAAATTCGACTACACCGCCGACGCCGACGCCACGAAAAACGACCTTACGGGACTCGCACGTGGTGGGCAGCAGGTGCAGCAGTGCCGCGCCGCCTACATCAAGGCAATCGAGGTGCTCGTGGAGCTCGCGTCCCTTCAGACGTCGTTTCTGACCCTCGATGAGGCCATCAAGACCACGAATCGTAGGGTTAACGCTCTGGAGAACGTGGTGAAGCCGCGACTCGAGAACACGATTAGTTACATCAAGGGGGAGCTGGACGAGCTCGAGAGGGAGGATTTCTTCAGGCTAAAGAAGATTCAGGGGTATAAGAAGAGGGAGATTGAGAGGCAGATGCTGCTGCAGAACAACTCCAATGTCGAGACTAATCTCCCTTTGCGCAAAGGGGTTTCGTACAATTCTGCTCACAATTTGTTGTCTGTGGGTGACAAAGATGAGGATATTATTTTCTGA 897 0.5507 MGQLYFRHSLLIILSQCSRSALQLPCLTDPVFRRKEKARKMSGQTQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVKEASLRVRSRQENVAGVKLPKFDYTADADATKNDLTGLARGGQQVQQCRAAYIKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQMLLQNNSNVETNLPLRKGVSYNSAHNLLSVGDKDEDIIF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02008 298 TIGRFAM V_ATPase_subD: V-type ATPase, D subunit 49 253 IPR002699 GO:0046961
Gma08g02008 298 Pfam ATP synthase subunit D 58 249 IPR002699 GO:0046961
Gma08g02008 298 PANTHER V-TYPE PROTON ATPASE SUBUNIT D-RELATED 41 298 - -
Gma08g02008 298 Coils Coil 220 240 - -
Gma08g02008 298 Gene3D - 40 239 - -
Gma08g02008 298 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 41 298 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02008 Gma-Chr8 18088005 18089870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02008 41 298 Primary Pumps ATPases(2) AT3G58730 76.208 8.51e-146 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02008 K02149 - gmx:100801612 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00222 07 1822047 1824976 Gma08g02008 08 18088005 18089870 GST