Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02003 ATGAAACATGAAGCTTTTCAAAGCACGTGCAGCAGGAAGTCAGAAAGAGTTTTGTATTGCAATGATTTTCTCATTAAATTAAGGAGTAGACTAGAGAATATGACTGTGACAGGTTCATCTTCTGGGCAGCCTCAATTCATTGCCAGCACCGGTGGTAGCCGGAGCTTCTCAAATGCGCCCTTGATTGAAAACTCAGATACTGATCAAATTGTTGTGCCTGATAGAACAAGCTGGAAAAACTTATTTGCATACATTGGGCCTGGATTTCTTGTTTCCATTGCATATATCGACCCAGGAAACTTTGAGACAGATCTTCAATCAGGGGCACAATATAAATATGAGTTACTTTGGATCATATTGGTGGCGTCATGTGCTGCACTTCTAATTCAAACAATGGCAGCTAATCTTGGGGTTGTCACTGGAATGCACCTAGCAGAGCATTGTAGAGCTGAATATTCTCGGGTGCCTAACTTTATCCTTTGGGTGATTGCTGAAATTGCCGTAGTGGCCTGTGACATTCCTGAAGTAATTGGGACAGCCTTTGCATTGAACATGCTCTTCAACATACCAGTTTGGATTGGTGTTCTTCTGACAGGATCCAGTACATTGATCCTCTTAGCATTACAGCAATATGGGGTAATTAGGAAACTTGAATTCTTCATTGCATTTCTAGTATTCACAATTGCTGGTTGCTTTATGGCTGAGCTTGGATATGCAAAGCCGGTGGCCAAAGAAGTTGTGACGGGTCTTTTTGTTCCAAAACTTCAGGGGCATGGTGCCACTGGTCTTGCAATTTCACTCCTTGGGGCAATGGTTATGCCCCACAATCTCTTCCTCCACTCAGCGCTGGTGCTTTCCAGGAAAATACCGCGATCAGTTCGTGGAATCAAAGAGGCTTGCAGATTTTATATGATAGAAAGTGCCTTTGCTCTTACGGTGGCCTTTCTCATAAATATTTCCGTTATTTCTGTAAGTGGTGCAGTTTGCAATTCTTCAAATTTAAGTGCTGGAGATCAGAATAGCTGTCAGGATTTGGATTTGAACAAGGCCTCCTTTTTATTAAGAAATGTCTTGGGCAAATGGAGTTCAAAACTATTTGCAATTGCTTTACTTGCCTCAGGTCAAAGTTCTACTATAACAGGAACATATGCAGGGCAATATGTCATGCAGGGATTTCTTGATTTGCGACTAAAGTCATGGATTCGGAATCTGCTAACTCGTTGCTTAGCCATTGTTCCTAGTTTGATTGTTGCACTCATTGGTGGCTCTGCTGGAGCTGGGGAGCTCATCATAATTGCATCGatgatcctatcatttgagcttccttttgctttgattccactcctcaagttcactagcagcaaaatCAAGATGGGAGAACATGTCAACTCAATCACGATCTCGGCTATTACTTGGATCATTGGTTCCCTCATCATGGGCATAAATATATACTATTTATTGACTAGCTTTGTCAAATTGCTTCTGCACGTCCACTTAAAAATTGTTACTAAGGTGTTTCTTGGAATATTGGGATTTTCGGGTGTGACATTATATATGGGAGGCATTGCATATCTAGTGTTTCGCAAAAATAAAAAAACTACACACTTTCTGGCATTTAGAACATCGGAAGAACAGCAAGTGGCAAATGAACAAGGTGATATATCAATGTATAATCTGCCAAGAGAAGACATAGTAAGCATGCAATTGCCTCAAAATAGTAGGAGTCCCACAGATATTGATAGAGAAATATCTTAG 1755 0.3949 MKHEAFQSTCSRKSERVLYCNDFLIKLRSRLENMTVTGSSSGQPQFIASTGGSRSFSNAPLIENSDTDQIVVPDRTSWKNLFAYIGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALLIQTMAANLGVVTGMHLAEHCRAEYSRVPNFILWVIAEIAVVACDIPEVIGTAFALNMLFNIPVWIGVLLTGSSTLILLALQQYGVIRKLEFFIAFLVFTIAGCFMAELGYAKPVAKEVVTGLFVPKLQGHGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYMIESAFALTVAFLINISVISVSGAVCNSSNLSAGDQNSCQDLDLNKASFLLRNVLGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLKSWIRNLLTRCLAIVPSLIVALIGGSAGAGELIIIASMILSFELPFALIPLLKFTSSKIKMGEHVNSITISAITWIIGSLIMGINIYYLLTSFVKLLLHVHLKIVTKVFLGILGFSGVTLYMGGIAYLVFRKNKKTTHFLAFRTSEEQQVANEQGDISMYNLPREDIVSMQLPQNSRSPTDIDREIS 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02003 584 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 45 573 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma08g02003 584 PANTHER METAL TRANSPORTER NRAMP1 45 573 - -
Gma08g02003 584 PRINTS Natural resistance-associated macrophage protein signature 264 287 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma08g02003 584 PRINTS Natural resistance-associated macrophage protein signature 374 393 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma08g02003 584 PRINTS Natural resistance-associated macrophage protein signature 160 186 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma08g02003 584 PRINTS Natural resistance-associated macrophage protein signature 214 235 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma08g02003 584 PRINTS Natural resistance-associated macrophage protein signature 402 419 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma08g02003 584 PRINTS Natural resistance-associated macrophage protein signature 434 453 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma08g02003 584 PRINTS Natural resistance-associated macrophage protein signature 188 207 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma08g02003 584 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 80 456 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma08g02003 584 Hamap Divalent metal cation transporter MntH [mntH]. 65 490 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma08g02003 584 Pfam Natural resistance-associated macrophage protein 101 464 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02003 Gma-Chr8 18044575 18054003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02003 49 580 Inorganic Solute Cotransporters AT1G15960 77.715 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02003 K21398 - gmx:100800523 1060.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00225 07 1850164 1857566 Gma08g02003 08 18044575 18054003 GST