Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g02002 ATGCCAACTGACACATCATCAGTTTCCGGCGGCGAAATCGTGTGTGTGACCGGTGCCGGCGGTTTCATAGCCTCTTGGCTTGTCAAACATCTCTTAGAGAAAGGCTACACTGTGAGAGGAACCGTGAGAAACCCAGATGATCCGAAGAATGGTCATTTGAAAGAGTTGGAAGGAGGCAAGGAGAGGCTAACTCTGCATAAAGTTGATCTCTTCGATATTGACTCCATTAAAGAAGCTCTTAACGGTTGCCACGGTGTCTTCCACACCGCTTCTCCAGTCACCGACAACCCTGAAGAGATGGTAGAGCCAGCAGTGAATGGAACGAAGAATGTGATCACAGCAGCAGCAGAAGCAAAAGTGCGACGGGTGGTGTTCACTTCGTCAATTGGCACAGTCTACATGGACCCCAATACGAGTAGGGATGCGTTGGTCGATGAATCATTCTGGAGTGATTTGGAGTACTGCAAGAACACCAAGAATTGGTATTGCTATGGAAAGACGGTGGCAGAACAAACAGCATGGGATGTAGCAAAAGAGAGAGGGGTGGACTTGGTTGTGGTGAACCCAGTTTTGGTTATTGGACCGTTGTTGCAACCAACCATTAATGCTAGTACAATTCACATCCTAAAGTACCTTACTGGCTCTGCCAAGACTTATGTAAATGCAACTCAGGCTTACATACATGTGAGGGATGTGGCATTAGCCCACATTCTTGTTTATGAGACACCTTCAGCTTCTGGTCGATACATATGTGCCGAAAGTTCGCTGCATCGTGGTGAGCTTGTTGAAATTTTGGCCAAGTTTTTTCCCGAGTACCCAATTCCTACCAAATGTTCAGATGAAAAGAATCCGAGAGTAAAACCCTACATATTTTCAAATCAAAAGCTGAAAGATTTGGGATTGGAATTCACCCCTGTGAAGCAGTGTCTATATGACACCGTTAAAAATCTTCAAGAGAACGGCCACCTTCCTGTCCCCCCAAAACAAGAAGACTCCTATTGA 1002 0.4581 MPTDTSSVSGGEIVCVTGAGGFIASWLVKHLLEKGYTVRGTVRNPDDPKNGHLKELEGGKERLTLHKVDLFDIDSIKEALNGCHGVFHTASPVTDNPEEMVEPAVNGTKNVITAAAEAKVRRVVFTSSIGTVYMDPNTSRDALVDESFWSDLEYCKNTKNWYCYGKTVAEQTAWDVAKERGVDLVVVNPVLVIGPLLQPTINASTIHILKYLTGSAKTYVNATQAYIHVRDVALAHILVYETPSASGRYICAESSLHRGELVEILAKFFPEYPIPTKCSDEKNPRVKPYIFSNQKLKDLGLEFTPVKQCLYDTVKNLQENGHLPVPPKQEDSY 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g02002 333 Pfam NAD dependent epimerase/dehydratase family 14 245 IPR001509 -
Gma08g02002 333 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 317 IPR036291 -
Gma08g02002 333 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 326 - -
Gma08g02002 333 CDD FR_SDR_e 14 301 - -
Gma08g02002 333 Gene3D - 3 333 - -
Gma08g02002 333 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 8 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g02002 Gma-Chr8 18039840 18043042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g02002 11 277 Monolignol Biosynthesis Gene Families AT1G80820 73.408 2.43e-142 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g02002 K09753 - gmx:100799994 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00226 07 1859150 1861970 Gma08g02002 08 18039840 18043042 GST