Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01986 ATGGCCCTTGTTCTCCGTCTAGGAAGCAGAAGCAGAAGAAGAAGCGTGTTGTTCTTCTCCACCAACTCCAACTCTCCCTTATCTTCCCTTTTCAATGACAATCTCAAACAATCCTCTCCCTCAAACACCACGCGTTCCTCCTTTCGCACTCCCCCTAACTCCCAACCAGGTTTCACCGACGACATCAACAAAAACCTCCACGAATTCCGCGCCCGGACCACCGCGCCTCCACCGCAGCAAACCTCGTTCCAGAAGCAAACTATTCGTGATTATCTCAGACGTAACTTCGATCAGTTGGATCAGAATCAAACTGAGACCGCTAAGAAAGCTTCACGCCAGAGACTTAGCGTGGAGGAGAAATTGGGGATGTTGAGGCCGGAGGAAACGAAAAAGGATTGGTTTTCCCTTTGTTTGGATGTTCATTCTCATAAAGGTTTGATAGCAATGGTTAAGAGGAGAAGAAGATTACTGAAATACCTTAAAAGAACTGATTGGGATTCCTATTGTTTTGTTATCTCCAAGCTAGAACTACGTGATAATCCTGATCATGGTTATAAAACACGATCGATCTGGTGTGGCAGCATAGGATCACATATCTGGTGGTCAGATGAACGAAAACCCAAAATAAGAAAAATGGAAAAAGACAATCAGCCAGTTGATGGAAAGCCAGCTGGGTTGTGCAGGTTTCATTCAGGTCAGTCAGGGTGTAGTGCAGAATCACCAGTTTTTCAGAGAACCTGCTACTCTGAAATATCAACACTTGCTCAAACTCCACGGAGCACTCTCTTCAAGGCAGATTTCTTGAATTACGAATCTCTTTGCTCAGCAATTTCTGGATGCACTGCAGTTTTCCATCTTGCTTGCCCTGTACCCTCAATTATTGTTCCCAACCCTCAGGTAGAAACGATTGAGCCTGCTGTGAAAGGAACCACTAATGTACTTGAAGCTAAAGTGCAACGACTTGTCTTTGTATCATCTATAGTTGCTATTTCCATTAACCCCAATTTACCTAAAGATAAAGTCATTGATGAGTCCTATTCGTCTGATAAAGATTACTGCAAAAGAACTCGGAACTGGTACTGTTTTTCCAAGACAGAGGCAGAGGAGCAGGCCCTTGACTTTGCCAAGAGAACTGGCCTTGATCTGGTAAGCATCTGCCCTTCCCTTGTGTTCTGGCCCATTTTACAGTCAACCACTGTTAATACCAGTAGCTTGGTTCTCCTCAAACTTTTAAAAGGTGTTGACTCATTGGAGAAGAAGATCCGTTGGATAGTGGATGTACGATATGTAGTTTATGCAATACTTTTGACTTATGAGAAGCTTGAGGCAAAAGGGAGATACGTATTCCATTCACATAACATCAAGACACGGGATATGCTGGAGAAACTGAAGAGTATATATCCCAGCTACAAATACCCTGCGAACTATACTGAGGTGGATGATTACATAAGTTTCAGCTCAGAGAAACTGCAAAGGTTGGGTTGGAAATACAGGTCACTGGAGGAAGCACTCATTGATTCTGTTGAGAGCTATCGGGAAGCTGGCCTCCTGCAATCAGAATAA 1563 0.4376 MALVLRLGSRSRRRSVLFFSTNSNSPLSSLFNDNLKQSSPSNTTRSSFRTPPNSQPGFTDDINKNLHEFRARTTAPPPQQTSFQKQTIRDYLRRNFDQLDQNQTETAKKASRQRLSVEEKLGMLRPEETKKDWFSLCLDVHSHKGLIAMVKRRRRLLKYLKRTDWDSYCFVISKLELRDNPDHGYKTRSIWCGSIGSHIWWSDERKPKIRKMEKDNQPVDGKPAGLCRFHSGQSGCSAESPVFQRTCYSEISTLAQTPRSTLFKADFLNYESLCSAISGCTAVFHLACPVPSIIVPNPQVETIEPAVKGTTNVLEAKVQRLVFVSSIVAISINPNLPKDKVIDESYSSDKDYCKRTRNWYCFSKTEAEEQALDFAKRTGLDLVSICPSLVFWPILQSTTVNTSSLVLLKLLKGVDSLEKKIRWIVDVRYVVYAILLTYEKLEAKGRYVFHSHNIKTRDMLEKLKSIYPSYKYPANYTEVDDYISFSSEKLQRLGWKYRSLEEALIDSVESYREAGLLQSE 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01986 520 Gene3D - 245 520 - -
Gma08g01986 520 Gene3D - 124 181 - -
Gma08g01986 520 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 252 513 IPR036291 -
Gma08g01986 520 Pfam Ribosomal protein S15 139 178 IPR000589 GO:0003735|GO:0005840|GO:0006412
Gma08g01986 520 SMART Ribosomal_S15_2 117 178 IPR000589 GO:0003735|GO:0005840|GO:0006412
Gma08g01986 520 MobiDBLite consensus disorder prediction 29 61 - -
Gma08g01986 520 SUPERFAMILY S15/NS1 RNA-binding domain 139 179 IPR009068 -
Gma08g01986 520 MobiDBLite consensus disorder prediction 29 62 - -
Gma08g01986 520 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 258 443 IPR002225 GO:0003854|GO:0006694|GO:0016616
Gma08g01986 520 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 260 517 - -
Gma08g01986 520 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 260 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01986 Gma-Chr8 17855530 17861849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01986 262 517 Monolignol Biosynthesis Gene Families AT2G33590 56.705 2.78e-96 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01986 - - gmx:100784817 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00246 07 2094343 2097332 Gma08g01986 08 17855530 17861849 GST