Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01977 ATGGAGGAGTCAGGGGAAAATTGGCCTTCCGATTCTTATTTAGATGACTTCGTCAACGATGATTTAGGTTTTGATGATGAAGAATTTGGTAGTGAAGATGATTCATTTTCTGGGATGGGCGAGACCGACAGAAAGAAGAGACAGCGAGAACTCACAGAGAGGTTCCTTGCACTTTCAGCCACCATACCAGGCTTCAAAAAGACGGACAAGACTTCCATCCTGGCCAATGCTAGCAGCTATGTGAAACAACTTCAGCAACGTGTGAGAGAGCTAGAGCAATTGCAAGAAGTTCAATCCAACGTTACTAGCAACGAAGGCGCCACCAGCTCTTGCGAAGTGAACTCATCATCCAATGATTATTACTGTGGTGGAGGAGGACCAAATGAAATTCTTCCAGAGGTCAAAGTAAGAGTGTTACAGAAGGAGGTTCTCATCATAATCCACTGTGAGAAACACAAGGGCATCATGCTCAAAATCCTTTCCCAGCTTGAAAATGTTAATCTCTCTATAGTCAATAGCAGCGTCTTACGATTTGGGAAATCCACTCTCGACATCACCATTGTTGCTCAGATGGGTGAGGGATACAAGATGACGGTGGGTGAACTAGTGAAGACCCTGAGAGTAGCGATCTTGACTCATTAG 642 0.4455 MEESGENWPSDSYLDDFVNDDLGFDDEEFGSEDDSFSGMGETDRKKRQRELTERFLALSATIPGFKKTDKTSILANASSYVKQLQQRVRELEQLQEVQSNVTSNEGATSSCEVNSSSNDYYCGGGGPNEILPEVKVRVLQKEVLIIIHCEKHKGIMLKILSQLENVNLSIVNSSVLRFGKSTLDITIVAQMGEGYKMTVGELVKTLRVAILTH 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01977 213 MobiDBLite consensus disorder prediction 18 34 - -
Gma08g01977 213 Coils Coil 74 101 - -
Gma08g01977 213 Gene3D - 41 106 IPR036638 GO:0046983
Gma08g01977 213 PANTHER PROTEIN, PUTATIVE-RELATED 42 213 - -
Gma08g01977 213 SMART finulus 42 90 IPR011598 GO:0046983
Gma08g01977 213 MobiDBLite consensus disorder prediction 1 44 - -
Gma08g01977 213 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 35 84 IPR011598 GO:0046983
Gma08g01977 213 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 45 97 IPR036638 GO:0046983
Gma08g01977 213 PANTHER BHLH TRANSCRIPTION FACTOR 42 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01977 Gma-Chr8 17758405 17764053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01977 45 210 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.604 3.47e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01977 - - gmx:100527052 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00255 07 2209865 2214950 Gma08g01977 08 17758405 17764053 GST
Gma08g01977 08 17758405 17764053 Gma13g03302 13 46971480 46975791 PCT