Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01957 ATGGCGACGGCAACATACCCTCCACCGCCACCTTATTACAGGCTTTACAAAGATTACTTGCAAGACCCTAATTCTGCTCCCGACCCTCCACCACCTATTGAAGGCACTTATCTTTGTTTTGGAGCCAATTACACTACTAGTGATGTTCTACCTACCTTGGAAGAACAAGGGGTGCGCCAGCTCTATTCTAAGGGCCCTAATGTTGATTTCAAGAAAGAGCTGAGGTCACTCAACGGAGAGTTGCAACTACATGTTTTGGAGCTTGCTGATATTCTTATTGAGAGGCCTTCACAGTATGCAAGAAGAGTAGAAGAAATTTCAACTGTATTCAAAAACTTACATCACCTTTTAAATTCATTGCGTCCTCATCAGGCGAGAGCAACATTGATTCATATTTTGGAACTTCAGATACAGCGTCGTAAACAAGCAGTGGAAGACATAAAGAAGAGGAGAGAAGAAGCCCGAAGGCTCCTTAACGAGTCCTTGGCAACACTTGATGGCCATTAG 507 0.4379 MATATYPPPPPYYRLYKDYLQDPNSAPDPPPPIEGTYLCFGANYTTSDVLPTLEEQGVRQLYSKGPNVDFKKELRSLNGELQLHVLELADILIERPSQYARRVEEISTVFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKKRREEARRLLNESLATLDGH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01957 168 Coils Coil 130 164 - -
Gma08g01957 168 Gene3D - 60 159 IPR044888 -
Gma08g01957 168 SUPERFAMILY Mediator hinge subcomplex-like 66 159 IPR037212 GO:0016592
Gma08g01957 168 Pfam MED7 protein 4 158 IPR009244 GO:0003712|GO:0006357|GO:0016592
Gma08g01957 168 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 168 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01957 Gma-Chr8 17540244 17542686 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Gma08g01957 Med7 3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01957 K15148 - gmx:100792250 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00273 07 2392139 2395388 Gma08g01957 08 17540244 17542686 GST