Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01904 ATGAAGAAAGAAAACAGTGTTACGCTGAAAGCTGGGGAGCTCCCTGGTCGATTGACTCGTGCTCGAGCTGCTGCTGCTCTTCGTGCATCTGGACAGCTACCCCCTTTGAAAGAGAGAGCACAGCAAAATCAGAATCTGTTATCCAAAGTCAATTCAAAAGGAGCAGTTTCTGATAATACATGTCTTCAGCGTAAAAGGAAGGCTGTTCTTCAGGAAGTTACTAATGTTTGCCGTGAAAATGCATACAAGGGTTGTTTCAACTCAACTAAAATTCAGGCTAAGAAAAGCAAGCTGGCTAAGGCTGGTCAAATTAATGTGTCCAAAGTGGCTCCTTCTGTTACTGTTGACTCCAAAGCAAAGGAAACAGCATTGCAATCGGAAGATACTATGTGCTCAATTAATTTGGAAAACAATGAATTTCTACGACTGAGTGCTAATGATTGTAGATTGCCTGAAAGTCAGATGTCTGGAATATCTGCTCATCCTTTGATTTCTCAGAAGAAAGACAAGAAAGATAACCTTCCAAAACTTTTGACTGCATTGAAGGATCCAGACATCACTAATATAGATGATGATGATCTTGAAGATCCTCAATCTTGCAGCCTCTATGCTGCTGATATCTACGACACCATGCGTGTTGCTGAGCTTGCAAGAAGGCCTCATCCGAACTTTATGGAGACAGTGCAGCGAGATATTACTCAAAGCATGCGTGGAATACTGGTTGACTGGCTTGTAGAGGTTTCTGAGGAATACAAATTGGTTACAGACACTCTTTACCTCACTGTGTATCTCATAGATTGGTTTCTGTCCAAAAATTACATTGAAAGACAAAGACTTCAGCTACTTGGCATCACCTGCATGCTAATTGCCTCGAAGTACGAAGAAATTAATGCCCCACGTATTGAAGATTTCTGCTTCATCACAGACAATACATACACGAAAGCTGAGGTACTAAAAATGGAGAGACAAGTGTTGAAGTCGTCTGAATATCAACTGTTTGCTCCCACTATACAAACTTTCGTCAGGAGGTTTCTTCGGGCAGCACAAGCTTCATACAAGGACCAAAGCCTTGAATTGGAGTACCTGGCCAATTACCTAGCTGAACTAACACTGATGGACTATGGTTTCTTGAATTTCCTTCCCTCTATCATTGCTGCATCAGCTGTATTTCTTGCAAGGTGGACACTAGATCAGTCAAACCACCCATGGAATCCAACTCTTCAACACTATGCCTGTTACAAAGCTTCAGATTTGAAAACCACAGTTCTTGCATTACAAGACCTACAGCTGAATACTGATGGCTGTCCTCTAACTGCCGTCCGCACGAAATACAGACAAGACAAGTTTAAATGTGTAGCGGCTTTGTCTTCACCAAAACTGCTTGAAACTTTGTTCTGA 1398 0.4185 MKKENSVTLKAGELPGRLTRARAAAALRASGQLPPLKERAQQNQNLLSKVNSKGAVSDNTCLQRKRKAVLQEVTNVCRENAYKGCFNSTKIQAKKSKLAKAGQINVSKVAPSVTVDSKAKETALQSEDTMCSINLENNEFLRLSANDCRLPESQMSGISAHPLISQKKDKKDNLPKLLTALKDPDITNIDDDDLEDPQSCSLYAADIYDTMRVAELARRPHPNFMETVQRDITQSMRGILVDWLVEVSEEYKLVTDTLYLTVYLIDWFLSKNYIERQRLQLLGITCMLIASKYEEINAPRIEDFCFITDNTYTKAEVLKMERQVLKSSEYQLFAPTIQTFVRRFLRAAQASYKDQSLELEYLANYLAELTLMDYGFLNFLPSIIAASAVFLARWTLDQSNHPWNPTLQHYACYKASDLKTTVLALQDLQLNTDGCPLTAVRTKYRQDKFKCVAALSSPKLLETLF 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01904 465 PANTHER CYCLIN-A2-4 46 465 - -
Gma08g01904 465 SMART cyclin_7 339 427 IPR013763 -
Gma08g01904 465 SMART cyclin_7 242 326 IPR013763 -
Gma08g01904 465 Gene3D - 206 454 - -
Gma08g01904 465 Gene3D - 220 333 - -
Gma08g01904 465 Pfam Cyclin, C-terminal domain 335 457 IPR004367 -
Gma08g01904 465 CDD CYCLIN 236 325 IPR013763 -
Gma08g01904 465 SUPERFAMILY Cyclin-like 195 331 IPR036915 -
Gma08g01904 465 Pfam Cyclin, N-terminal domain 206 331 IPR006671 -
Gma08g01904 465 PANTHER CYCLINS 46 465 IPR039361 -
Gma08g01904 465 SUPERFAMILY Cyclin-like 335 460 IPR036915 -
Gma08g01904 465 CDD CYCLIN 335 425 IPR013763 -
Gma08g01904 465 SMART Cyclin_C_2 335 458 IPR004367 -
Gma08g01904 465 PIRSF Cyclin_A_B_D_E 13 464 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01904 Gma-Chr8 17126261 17132532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01904 1 465 Core Cell Cycle Gene Families AT1G80370 54.043 2.69e-165 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01904 K06627 - gmx:100793657 877.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01904 08 17126261 17132532 Gma08g01904 08 17126261 17132532 ECH
Gma07g00320 07 2726952 2732554 Gma08g01904 08 17126261 17132532 GST