Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01903 ATGGCCAAAGAAGGTCTTGGACTTGAAATCACTGAGCTAAGGTTGGGTCTACCTGATGCGGAGCATCAAGTAAGTGTAGTCAATAAGAAAAATGAGAAGAAGAGGGCATTCTCGGAAATTGATGATGGTGTTGGAGATGAAAATAGCTCCTCCGGCGGAGGCGACCGGAAAATGGAGACGAATAAGAGTCAAGTGGTGGGGTGGCCTCCGGTGTGCTCTTACCGGAAGAAGAACAGCATGAACGAAGGTGCTTCAAAGATGTACGTGAAGGTTAGCATGGACGGTGCTCCTTTCTTGCGTAAAATTGATTTGGGTCTGCATAAGGGCTACTCAGATTTAGCTTTGGCTTTGGACAAGCTCTTTGGTTGCTATGGAATGGTGGAGGCGTTGAAAAATGCAGACAATTCTGAACACGTTCCCATTTATGAGGACAAAGATGGTGATTGGATGCTTGTTGGAGATGTCCCTTGGGAAATGTTTATGGAGTCATGCAAGAGGCTGAGGATTATGAAGAAATCAGATGCGAAGGGCTTCGGTTTGCAACCAAAAGGATCTTTAAAGGGATTCATAGAAAGCGCGGCAAAGTGA 588 0.4575 MAKEGLGLEITELRLGLPDAEHQVSVVNKKNEKKRAFSEIDDGVGDENSSSGGGDRKMETNKSQVVGWPPVCSYRKKNSMNEGASKMYVKVSMDGAPFLRKIDLGLHKGYSDLALALDKLFGCYGMVEALKNADNSEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKKSDAKGFGLQPKGSLKGFIESAAK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01903 195 MobiDBLite consensus disorder prediction 37 60 - -
Gma08g01903 195 Gene3D - 81 183 - -
Gma08g01903 195 SUPERFAMILY CAD & PB1 domains 82 171 - -
Gma08g01903 195 PANTHER AUXIN-RESPONSIVE PROTEIN IAA6 4 178 - -
Gma08g01903 195 Pfam AUX/IAA family 54 178 IPR033389 -
Gma08g01903 195 ProSiteProfiles PB1 domain profile. 86 174 IPR000270 GO:0005515
Gma08g01903 195 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 178 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01903 Gma-Chr8 17114767 17118209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01903 69 176 B3 DNA Binding Superfamily AT4G23980 35.185 3.43e-11 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gma08g01903 AUX_IAA 4.3e-45 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01903 K14484 - gmx:547784 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01903 08 17114767 17118209 Gma08g01903 08 17114767 17118209 ECH
Gma07g00321 07 2740780 2744540 Gma08g01903 08 17114767 17118209 GST
Gma08g01903 08 17114767 17118209 Gma13g03230 13 46377503 46380731 PCT
Gma08g01903 08 17114767 17118209 Gma15g00125 15 1028229 1031442 PCT