Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01897 ATGATTCAAAATGGTTGCATTGTATCCCAAGGGTGTGCCCCTCTGAATTCTAGGTCACGCAACCATGTCATACCTAGTACCTCTGTCTTTCGTTGCGCTTCTCGAATGCCTCCCAAGGTTGCCGTCTCTAACATCCGGAGCTTTTGGGGACATAATTTGGAATTTCAATCCTTGTTGCCAAGAGGAATGACATTGTCAAACACGTTCACTGCATCAAGCCTACGTGTAAGTGAGGGTCAAAATTTTCTCTTTCGTGTTCTCCCTCTGTTACCCCATTTGCGCAAGTCTAATATGGTCCCTCGGGCATCAAAGGATGTCCCAACTAGCTTTCGTTATCCTCCAATGACCAAGAAACCGCAATGGTGGTGGAGATCATTAGCATGCCTCCCATACCTCATGCCTCTCCATGAGACATGGATGTATGCCGAGACGGCATACAATCTTCACCCGTTTTTGGAATGCTTTGAATTCTATACGTACCCTTTTCTTATGGCAATTGGGAGCCTGCCTAGCTGGTTTCTTATGGCATACTTCTTTGTTGCATATCTTGGAATCGTGAGGAGAAAAGAGTGGCCTCATTTCTTCAGATTTCATGTTGTGATGGGAATGTTATTGGAGATTGCCCTGCAGGTTATAGGGACTGTGAGCCGTTGGATGCCACTATCACTCTACTGGGGTAAACTGGGAATGCATTTCTGGACTGCCGTATCATTTGGTTATCTCTTTACTGTCTTGGAGAGCATAAGGTGCGCTCTTGTTGGTATGTATGCTGACATTCCTTTCATCTGTGATGCAGCATATATCCAAATTCCATATGATTAA 822 0.4489 MIQNGCIVSQGCAPLNSRSRNHVIPSTSVFRCASRMPPKVAVSNIRSFWGHNLEFQSLLPRGMTLSNTFTASSLRVSEGQNFLFRVLPLLPHLRKSNMVPRASKDVPTSFRYPPMTKKPQWWWRSLACLPYLMPLHETWMYAETAYNLHPFLECFEFYTYPFLMAIGSLPSWFLMAYFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLSLYWGKLGMHFWTAVSFGYLFTVLESIRCALVGMYADIPFICDAAYIQIPYD 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01897 273 Pfam Chloroplast import apparatus Tic20-like 93 266 IPR005691 -
Gma08g01897 273 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 1 273 IPR005691 -
Gma08g01897 273 PANTHER HIT-TYPE ZINC FINGER FAMILY PROTEIN-RELATED 1 273 - -
Gma08g01897 273 TIGRFAM 3a0901s05TIC20: chloroplast protein import component, Tic20 family 1 273 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01897 Gma-Chr8 17040478 17042892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01897 56 273 Chloroplast and Mitochondria Gene Families AT4G03320 39.286 5.21e-48 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01897 - - gmx:100818669 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00060 07 480754 483362 Gma08g01897 08 17040478 17042892 GST