Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01896 ATGGGTGTGAACTCTTACTCCAACAGTAGAGTTGAGCACCTAGCTTGCAACAACAATGGTAGTAACAATAACATGAAGATCCAAGCTGAGATACAAATGCCACCCTTGGAAATTCACAAGGTTCGGTTGCCACCAGAACGCACCACCTTGCAGAAACTCAGACACAGACTCTCTGAGATCTTCTTCCCAGATGATCCACTCCACAGGTTCAAGAACCAAACATGCCTCATGAAGCTCCTCCTTGCACTTCAATATTTCTTCCCCATTTTTCAATGGGCCCCTCACTACAACCTCTCCCTTCTCCGCTCCGACATCATCTCCGGTCTCACCATTGCTAGCCTCGCCATTCCTCAGGGAATCAGCTATGCTAAGTTTGCAAACTTGCCTCCTATTCTTGGATTATATTCCAGTTTTGTGCCTCCACTGATATATTCCCTGCTTGGAAGTTCTAGACATCTTGGTGTTGGTCCAGTTTCAATTGCATCTTTGGTCATGGGATCAATGTTAAGCGAGACGGTTTCCTTTAGTCAAGATCCAATTCTCTATCTTAAGTTGGCTTTCACTGCCACTTTTTTTGCCGGTTTGTTCCAATCTTCTCTGGGTATATTAAGGTTAGGCTTTGTAATTGATTTTCTCTCAAAGGCAACACTGGTGGGTTTTATGGCTGGTGCAGCGATTATTGTATCACTGCAACAGCTGAAAGGGTTGCTTGGAATAGTTCATTTCACCAACAAGATGCAAATAACACCTGTACTGATTTCTGTTTTCAAGCAAAGAGACGAGTGGTCATGGCAAAACCTTTTGTTGGGATTCAGTTTCCTACTATTCCTGTTAACAACAAGGCACATTAGCTTGAAGAAGCCAAAACTATTCTGGGTTTCAGCAGCTGCCCCATTGACATCAGTTATTCTGTCAACCATTTTTGTATTTATTCTGAGAAATAAGACACATAAAATTGCTATTATTGGTGAATTGCCAAAGGGACTTAATCCCCCATCATCAAATATGTTATACTTCAATGGTCCTTATTTGGCTCTTGCTATCAAAACAGGACTTGTCACTGGGATCTTATCTCTCACTGAAGGAATTGCAGTAGGAAGAACATTTGCTGCACTTAAGAACTACCAGGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTTATGAACATAGCTGGCTCTTGTTCTTCATGCTATGTCACAACAGGATCCTTTTCCCGATCAGCTGTTAACTACAATGCCGGGGCACAGACTGCAGTCTCAAATATAATCATGGCATCAGCAGTTCTTGTGACCCTTTTGTTTCTGATGCCATTGTTCTATTACACGCCAAATGTAGTATTAGCAGCCATTATCATCACTGCTGTTGTAGGGCTAATAGATTATCAAGGTGCATATAAGTTGTGGAAGGTTGACAAGCTTGATTTCTTGGCCTGCTTGTGCTCCTTTTTCGGTGTTTGGTTCATTTCAGTGCCTTTAGGCCTTGGAATAGCGGTGGCAATATCAGTCTTCAAGATCTTGCTTCATGTCTCTAGGCCAAACACACTGGTTTTGGGGAATATACCAGGGACGCCAATATTCCACAGCCTAAACCAATATAGAGAAGCTTTGAGGATTCCTTCATTTGTCATTTTGGCTGTTGAGTCTCCCATCTACTTTGCTAATTCAACGTACCTACAAGAAAGGATACTGAGATGGGTTAGAGAAGAGGAAGAGCGAGTAAAAGCAAATAATGAAAGTACATTGAAGTGCATAATTTTGGACATGACAGCTGTTACAGCCATAGACACAAGTGGAATCGATACTCTATATGAACTCAGAAAGGTACTGGACAAAAGATCACTTCAGCTTGTGTTGGCAAATCCTGTTGGAAATGTGATGGAAAAGTTGCATCAGTCAAATATTTTGGATTCCTTTGGGTTGAAAGGAGTCTATCTCTCAGTAGGAGAAGCTGTGGCTGACATTTCATCTTCCTGGAAAGCTCAGCCTTGA 1992 0.4202 MGVNSYSNSRVEHLACNNNGSNNNMKIQAEIQMPPLEIHKVRLPPERTTLQKLRHRLSEIFFPDDPLHRFKNQTCLMKLLLALQYFFPIFQWAPHYNLSLLRSDIISGLTIASLAIPQGISYAKFANLPPILGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSETVSFSQDPILYLKLAFTATFFAGLFQSSLGILRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLLGIVHFTNKMQITPVLISVFKQRDEWSWQNLLLGFSFLLFLLTTRHISLKKPKLFWVSAAAPLTSVILSTIFVFILRNKTHKIAIIGELPKGLNPPSSNMLYFNGPYLALAIKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMASAVLVTLLFLMPLFYYTPNVVLAAIIITAVVGLIDYQGAYKLWKVDKLDFLACLCSFFGVWFISVPLGLGIAVAISVFKILLHVSRPNTLVLGNIPGTPIFHSLNQYREALRIPSFVILAVESPIYFANSTYLQERILRWVREEEERVKANNESTLKCIILDMTAVTAIDTSGIDTLYELRKVLDKRSLQLVLANPVGNVMEKLHQSNILDSFGLKGVYLSVGEAVADISSSWKAQP 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01896 663 ProSitePatterns SLC26A transporters signature. 130 151 IPR018045 GO:0008271|GO:0008272
Gma08g01896 663 SUPERFAMILY SpoIIaa-like 537 654 IPR036513 -
Gma08g01896 663 CDD STAS_SulP_like_sulfate_transporter 533 648 - -
Gma08g01896 663 PANTHER SULFATE TRANSPORTER 24 663 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gma08g01896 663 Pfam Sulfate permease family 101 480 IPR011547 GO:0016021
Gma08g01896 663 Pfam STAS domain 533 651 IPR002645 -
Gma08g01896 663 PANTHER SLC26A/SULP TRANSPORTER-RELATED 24 663 - -
Gma08g01896 663 ProSiteProfiles STAS domain profile. 532 655 IPR002645 -
Gma08g01896 663 Gene3D STAS domain 512 657 IPR036513 -
Gma08g01896 663 TIGRFAM sulP: sulfate permease 88 651 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01896 Gma-Chr8 17023808 17027750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01896 6 663 Inorganic Solute Cotransporters AT3G15990 73.788 0.0 1019
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01896 K17471 - gmx:100817604 1275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01896 08 17023808 17027750 Gma08g01896 08 17023808 17027750 ECH
Gma07g00058 07 467313 471386 Gma08g01896 08 17023808 17027750 GST
Gma13g03219 13 46258547 46263695 Gma08g01896 08 17023808 17027750 PCT
Gma15g00135 15 1151275 1156648 Gma08g01896 08 17023808 17027750 PCT
Gma08g01896 08 17023808 17027750 Gma13g03219 13 46258547 46263695 PCT
Gma08g01896 08 17023808 17027750 Gma15g00135 15 1151275 1156648 PCT