Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01894 ATGAGCGTGGTGGGATTCGATTTCGGTAACGAGAGTTGCATTGTTGCGGTTGCGAGGCAGAGAGGGATTGACGTTGTGCTCAATGATGAGTCCAAGCGTGAAACGCCCGCCATTGTGTGCTTCGGTGACAAGCAACGCTTCATTGGCACTGCTGGTGCTGCCTCCACTATGATGAACCCTAAGAATTCAATCTCCCAGTTTAAGAGACTCATTGGTAGGAAATTCTCTGATCCCGAATTGCAGCGGGATCTTAAGTCGTTGCCGTTTCTTGTCACCGAGGGGAGTGATGGGTACCCGTTGATTCATGCGCGGTACATGGGTGAGTCCAAGACGTTTACGCCTACCCAAGTGTTTGGAATGATGCTGTCGAATCTTAAGGAAATTGCGGAGAAGAATCTTACTACAGCGGTTGTGGATTGTTGCATTGGAATCCCGGTTTATTTTACTGATCTGCAGAGAAGGGCGGTGCTGGATGCGGCCACGATTGCTGGTCTGCACCCACTTCGGTTGATTCAGGAAATGACTGCCACTGCCTTGGCCTATGGGATTTATAAAACGGACCTTCCAGAAAACGATCAGCTGAATGTTGCGTTTGTTGATGTTGGGCATGCTAGCATGCAAGTGTGCATTGCTGGATTCAAGAAGGGGCAGCTGAAAGTGTTGGCTCATTCATATGATAGGTCTCTCGGCGGTAGGGATTTTGACGAGGTTTTGTTCCATCACTTTGCTGGGAAGTTTAAGGAGGAGTACAAGATTGATGTTTTCCAGAATGCCAGGGCTTGCATCAGGCTCAGGACTGCCTGTGAGAAGATCAAGAAGATGCTTAGTGCGAATCCTGTGGCGCCTCTCAACATTGAGTGCTTGATGGATGAGAAGGATGTCCGGGGCTTCATCAAGCGAGATGAGTTTGAGCAACTAAGTCTTCCAATTTTGGAACGTGTGAAGGGACCTCTGGAGAAGGCACTTGCTGAAGCAGGTCTTACCGTTGAAAATGTACACACAGTTGAGGTGGTTGGTTCAGGTTCTCGGGTACCGGCCATTAACAAAATATTGACAGAGTTTTTCAAAAAGGAGCCTAGGCGGACAATGAATGCTAGTGAGTGTGTTGCTAGGGGCTGTGCGTTGGAATGCGCAATTCTTAGTCCAACGTTCAAAGTACGAGAATTTCAGGTCAACGAAAGCCTTCCTTTCTCGATTTCTCTTTCATGGAAAGGTTCTGGTCCAGATGCACAGGACAATGGATCAGAAAATCAGCAGAGTTCCCTTGTTTTTCCTAAGGGTAATCCCATACCAAGTATCAAGGCACTGACATTCTGCAGGGCAGGAACATTCTCTGTTGATGTATTATATGATGATGCAAGTGGGCTGCAAACACCTGCTAAGATCAGCACATATACTATTGGTCCTTTCCAAACTACAAATGGTGAAAGGGCAAAAGTTAAAGTGAAAGTTCGTCTGAATCTGCACGGAATTGTATCCCTTGAGTCTGCAACACTCCTGGAAGAGGAAAAAGTTGGGGTTCCAGTTACCAAAGAGGCAGCAGGGGAAAATACTAAGATGGACATTGATGAAGTCCCTGCTGAGGCTGCTGCACCTCCCGCCTCCAATGACACTGGTGCTAATATGGAAGGTGCAAAGGCTAGTACTGATGCCTCTGGGGTTGAAAATGGCATCCCTGAGGGTGGAGATAAGCCTTTGCAAAAGGATACTGATACCAAGGTTCAGGCTCCAAAGAAAAAGGTTAAGAAAACAAACATTCCTGTAGCAGAGTTAGTTTATGGAGCAATGGTGCCTGTGGATGTCCAGAAAGCACTAGAAAAGGAGTTTGAAATGGCTTTGCAAGATCGTGTGATGGAAGAAACAAAAGACAAGAAAAATGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACGAATACCAAGAGTTTGTCACTGCTTCAGAGAGAGATGATTTTACTGCTAAACTTCAGGAAGTGGAAGATTGGCTTTATGATGAGGGTGAAGATGAAACTAAAGGTGTATATATTGCCAAGCTTGAAGAACTCAAAAAGCAAGGTGATCCAATTGATGGGCGATACGAAGAATTCACGGAGAGGGGTACTATAATTGAACAGTTCGTGTATTGTATAAATAGTTACAGACAAGTTGCAATGTCAAATGATCCTAGATTTGAGCACATTGACATTAACGAGAAACAGAAGGTCATAAATAAATGTGTTGAAGCTGAGAAGTGGTTTAATGAGAAGCAGCAGCAGCAGAGCTCACTTCCAAAATATGCCAACCCTGTACTCTTGTCAGCTGAAATGAGAAAGAAAGCTGAAGATGTCGATAGGTTCTGCAAGCCGATTATGACAACACAGAAGCCAACAAAGGCAGTTACTCCAGCAGGACCAGCAACCCCATCTTCTCAGAGTGATGAGCAACAGCAACCCCAGGGGGATTCTGATGTCAACAGTAATGAGAATGCTGGGAATAGCAGTAGTCAGGCTGCACCAGCATCTACCGAACCAATGGAGACTGAAAAGGTTGGTGACTCCCTCCTAGCTGAACTTATGGCAGTTAAGTTTCAACTTCATGCTTCAGTGAATTTCTCTGTGATTTTTCTCCCAAAATTTTCATCTCTCGCCATCGCCGTTGGAGAACGCTCCAATTTTCTCTCCAACAATTCGTTCTTTCCCTTCTCAATTTCCGGCGAGTTCTCCCTCTTCAATTTCTCAATCCAGATCTGGATGCACATGAACCATTGTTTGCATTTGGGGCAACCTTGA 2778 0.4536 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPKNSISQFKRLIGRKFSDPELQRDLKSLPFLVTEGSDGYPLIHARYMGESKTFTPTQVFGMMLSNLKEIAEKNLTTAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLRLIQEMTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLAHSYDRSLGGRDFDEVLFHHFAGKFKEEYKIDVFQNARACIRLRTACEKIKKMLSANPVAPLNIECLMDEKDVRGFIKRDEFEQLSLPILERVKGPLEKALAEAGLTVENVHTVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVARGCALECAILSPTFKVREFQVNESLPFSISLSWKGSGPDAQDNGSENQQSSLVFPKGNPIPSIKALTFCRAGTFSVDVLYDDASGLQTPAKISTYTIGPFQTTNGERAKVKVKVRLNLHGIVSLESATLLEEEKVGVPVTKEAAGENTKMDIDEVPAEAAAPPASNDTGANMEGAKASTDASGVENGIPEGGDKPLQKDTDTKVQAPKKKVKKTNIPVAELVYGAMVPVDVQKALEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDEYQEFVTASERDDFTAKLQEVEDWLYDEGEDETKGVYIAKLEELKKQGDPIDGRYEEFTERGTIIEQFVYCINSYRQVAMSNDPRFEHIDINEKQKVINKCVEAEKWFNEKQQQQSSLPKYANPVLLSAEMRKKAEDVDRFCKPIMTTQKPTKAVTPAGPATPSSQSDEQQQPQGDSDVNSNENAGNSSSQAAPASTEPMETEKVGDSLLAELMAVKFQLHASVNFSVIFLPKFSSLAIAVGERSNFLSNNSFFPFSISGEFSLFNFSIQIWMHMNHCLHLGQP 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01894 925 Gene3D - 38 113 - -
Gma08g01894 925 MobiDBLite consensus disorder prediction 787 844 - -
Gma08g01894 925 Pfam Hsp70 protein 3 696 IPR013126 GO:0005524|GO:0140662
Gma08g01894 925 CDD HSPA4_like_NDB 2 381 - -
Gma08g01894 925 PRINTS 70kDa heat shock protein signature 363 383 - -
Gma08g01894 925 PRINTS 70kDa heat shock protein signature 2 15 - -
Gma08g01894 925 PRINTS 70kDa heat shock protein signature 140 160 - -
Gma08g01894 925 PRINTS 70kDa heat shock protein signature 332 348 - -
Gma08g01894 925 PRINTS 70kDa heat shock protein signature 30 42 - -
Gma08g01894 925 Gene3D - 186 360 - -
Gma08g01894 925 Gene3D - 598 707 IPR029048 -
Gma08g01894 925 Gene3D - 5 374 - -
Gma08g01894 925 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 846 - -
Gma08g01894 925 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 629 IPR029047 -
Gma08g01894 925 MobiDBLite consensus disorder prediction 790 838 - -
Gma08g01894 925 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 599 695 IPR029048 -
Gma08g01894 925 MobiDBLite consensus disorder prediction 529 580 - -
Gma08g01894 925 ProSiteProfiles Ig-like domain profile. 345 463 IPR007110 -
Gma08g01894 925 PANTHER HSC70CB, ISOFORM G-RELATED 1 846 - -
Gma08g01894 925 Gene3D Actin; Chain A, domain 4 230 313 - -
Gma08g01894 925 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Gma08g01894 925 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Gma08g01894 925 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 712 794 IPR029048 -
Gma08g01894 925 MobiDBLite consensus disorder prediction 562 578 - -
Gma08g01894 925 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 593 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01894 Gma-Chr8 17012537 17019795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01894 4 666 Calmodulin-binding Proteins AT1G16030 29.552 3.28e-86 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01894 K09489 - gmx:100816539 1645.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01894 08 17012537 17019795 Gma08g01894 08 17012537 17019795 ECH
Gma07g00056 07 456493 463541 Gma08g01894 08 17012537 17019795 GST
Gma13g03214 13 46235965 46239655 Gma08g01894 08 17012537 17019795 PCT
Gma15g00141 15 1170995 1176511 Gma08g01894 08 17012537 17019795 PCT
Gma08g01894 08 17012537 17019795 Gma13g03214 13 46235965 46239655 PCT
Gma08g01894 08 17012537 17019795 Gma15g00141 15 1170995 1176511 PCT