Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01893 ATGGATCCCAAATTAAAGAAGATCCCAAAATCCCTTCGAGACTACCTCTTCAAGATCAAAACCCACCAGCGTACACACATCAAATTACCCTCTAAGAAATGGATCCTCACGTCGTGCAAACATCCTAGGACTCCTTCTCTCGACATAGACAACATGAAAAACATGCACCGACAACTACGTCAAAGACGACGAAGCCATGTTAGCGGACATCGACCAAGGTTCGATGAATCGCCACTGAACCTCTTCACGGTCACAACCACCGAAGCAGGGTCCAGCTCCGCCACGTCGGAAAGCGAGATCGCGGAGGAGCAGACGGTGATTCCGGGAAATTGTGTGGTGGTGCTGGCGAACTCAGTGAACCCCAGCAAGGATTTCCAGCGATCCATGGAGAGCGTTGTGGAAGCGAGATTGAGGAATTGTGAAAAAGTGGATTGGGACTTCATGCAGGAGCTTTTGTTCTGTCACATGAACCTGAACAACAAGAAGTAG 489 0.4928 MDPKLKKIPKSLRDYLFKIKTHQRTHIKLPSKKWILTSCKHPRTPSLDIDNMKNMHRQLRQRRRSHVSGHRPRFDESPLNLFTVTTTEAGSSSATSESEIAEEQTVIPGNCVVVLANSVNPSKDFQRSMESVVEARLRNCEKVDWDFMQELLFCHMNLNNKK 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01893 162 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 4 58 IPR038933 GO:0045892
Gma08g01893 162 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 4 58 - -
Gma08g01893 162 Pfam Transcriptional repressor, ovate 118 162 IPR006458 -
Gma08g01893 162 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 63 162 IPR038933 GO:0045892
Gma08g01893 162 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 63 162 - -
Gma08g01893 162 ProSiteProfiles OVATE domain profile. 114 162 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01893 Gma-Chr8 17007474 17008257 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gma08g01893 Ovate 5.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01893 - - gmx:100777653 212.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma15g00142 15 1180950 1182136 Gma08g01893 08 17007474 17008257 PCT
Gma08g01893 08 17007474 17008257 Gma15g00142 15 1180950 1182136 PCT