Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01877 ATGGAGATGGCCAGCGATGAGGTCCGGCAAGAGGATACTGCTGATATTAGCAGCGACAACTCAGGACCCGTGAGATCCAGGTCAGAAGAAGATTTTGATTGTGATGATGTTCATGATGGTGATGACAAAGATAACGATGATAAGAATAGAAAGAAGAAGAGAAAGTATCACAGGCACACCACTGAACAGATAAGAGAAATGGAAGCGCTTTTCAAGGAATCACCGCATCCTGATGAAAAGCAGAGGCAAAAACTCAGCCAGCAACTTGGCCTTGCTCCAAGGCAAGTCAAGTTTTGGTTCCAAAATCGTCGAACCCAAATCAAGGCACTACAAGAGCGCCATGAAAACTCATTGTTGAAGACAGAATTAGACAAACTTAGGGAGGAAACTAAGGCCATGCGAGAAACCATAAACAAATCTTGTTGCCCCAATTGTGGCATGGTAACGGCTACCATAGATGCTTCCATGTCCACTGAAGAAAAACAACTTCTTATTGAAAATGCCAAACTCAAAGCTGAGGTAGAGAAGCTCCGAACAGCTTTAGGGAAATTCTCACCAAGGACAACGTCTCCTACTACATCTTCTGCTGGCCATGATGAAGAAGAGAATAGAAACTCTTTGGGTTTTTACAGTGTACTTTTCGGGCTCGACAAATCAAGGATAATGGATGTAGCAAACCGAGCAACGGAGGAGCTCATAAAGATGGCAACTATGGGGGAACCATTATGGGTTCGTAGCGTTGAAACAGGTCGCGAAATACTTAACTACGATGAATATGTGAAGGAGATGGCAGCTGAAAATTCGGGCAGTGAAAGGCCAAAGACATTCATCGAAGCCTCAAGAGAAACTGAGGTTGTTTTTATGGATCTTCCTCGGCTTCTCCAAAGTTTTCTAGACGTGAATCAATGGAAGGAAATGTTTCCGTGCTTAATATCAAAGGCTGTAACTGTTGATGTTATAAGCAATGGCGAAGGTTCTAACAGGAATGGTGCAGTGCAATTGATGTTTGCTGAGCTTCAAATGCTCACTCCTATGGTGCCCACCCGAGAAGTGTATTTTGTGAGGTGCTGCAAACAGTTGAGTGATGAACAGTGGGCAATAGTTGATGTCTCCATAGACAAAGTAGAAGACAACATTGATGCATCCCTTGTGAAATGTAGAAAACGCCCGTCTGGGTGTATTATTGAGGATAAGTCAAATGGCCATTGCAAGGTGATATGGGTGGAGCACTTGGAGTGCCAAAAGAGCACAATTCATACAATGTACCGAACTATTGTCAACAGTGGTCTAGCTTTTGGGGCAAGGCATTGGATAGCAACACTACAACTTCATTGTGAACGTTTGGTTTTCTACATGGCAACGAATGTTCCCATGAAGGATTCAACTGGTGTTGCCACGTTGGCTGGGAGGAAGAGCATTTTGAAGTTGGCACAAAGGATGACGTGGAGTTTCTGCCATGCAATTGGTGCATCAAGTTTTCATACATGGACCATGGTCACAAGTAAAACAGGAGAAGACATAAGGATTAGCTCTAGGAAGAACTTGAATGACCCAGGTGAACCTCTTGGGGTTATCTTGTCTGCCGTTTCTTCTGTGTGGCTTCCTGTCTCTACTAACGTGCTGTTCGATTTCTTGAGGGATGAAGCTCGTCGAAGTGAGTGGGATATCATGTCCAGTGGTGGGTCAGTTCAGTCCGTTGCAAATTTAGCTAAAGGAAAAGACCGAGGCAACGTTGTAAACATTCAAGTAAAAAATACAATCAAAAGATAA 1770 0.4362 MEMASDEVRQEDTADISSDNSGPVRSRSEEDFDCDDVHDGDDKDNDDKNRKKKRKYHRHTTEQIREMEALFKESPHPDEKQRQKLSQQLGLAPRQVKFWFQNRRTQIKALQERHENSLLKTELDKLREETKAMRETINKSCCPNCGMVTATIDASMSTEEKQLLIENAKLKAEVEKLRTALGKFSPRTTSPTTSSAGHDEEENRNSLGFYSVLFGLDKSRIMDVANRATEELIKMATMGEPLWVRSVETGREILNYDEYVKEMAAENSGSERPKTFIEASRETEVVFMDLPRLLQSFLDVNQWKEMFPCLISKAVTVDVISNGEGSNRNGAVQLMFAELQMLTPMVPTREVYFVRCCKQLSDEQWAIVDVSIDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSTIHTMYRTIVNSGLAFGARHWIATLQLHCERLVFYMATNVPMKDSTGVATLAGRKSILKLAQRMTWSFCHAIGASSFHTWTMVTSKTGEDIRISSRKNLNDPGEPLGVILSAVSSVWLPVSTNVLFDFLRDEARRSEWDIMSSGGSVQSVANLAKGKDRGNVVNIQVKNTIKR 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01877 589 MobiDBLite consensus disorder prediction 181 202 - -
Gma08g01877 589 Gene3D - 38 122 - -
Gma08g01877 589 ProSiteProfiles START domain profile. 214 450 IPR002913 GO:0008289
Gma08g01877 589 Coils Coil 109 136 - -
Gma08g01877 589 SUPERFAMILY Bet v1-like 216 447 - -
Gma08g01877 589 SUPERFAMILY Homeodomain-like 40 111 IPR009057 -
Gma08g01877 589 SMART START_1 223 447 IPR002913 GO:0008289
Gma08g01877 589 CDD START_ArGLABRA2_like 218 446 - -
Gma08g01877 589 Pfam START domain 224 447 IPR002913 GO:0008289
Gma08g01877 589 SUPERFAMILY Bet v1-like 469 568 - -
Gma08g01877 589 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 10 584 - -
Gma08g01877 589 Coils Coil 160 180 - -
Gma08g01877 589 CDD homeodomain 57 108 IPR001356 GO:0003677
Gma08g01877 589 Pfam Homeodomain 53 108 IPR001356 GO:0003677
Gma08g01877 589 MobiDBLite consensus disorder prediction 1 63 - -
Gma08g01877 589 ProSiteProfiles 'Homeobox' domain profile. 50 110 IPR001356 GO:0003677
Gma08g01877 589 Gene3D - 278 445 IPR023393 -
Gma08g01877 589 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 10 584 IPR042160 -
Gma08g01877 589 ProSitePatterns 'Homeobox' domain signature. 85 108 IPR017970 GO:0000981|GO:0006355
Gma08g01877 589 SMART HOX_1 52 114 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01877 Gma-Chr8 16890519 16897286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01877 16 582 Homeobox Transcription Factor Family AT1G79840 64.533 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gma08g01877 START 3.7e-57 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01877 K09338 - gmx:100789432 1101.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00185 07 1571811 1577462 Gma08g01877 08 16890519 16897286 GST