Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01874 ATGAGTTGCTCATTGAAAGCTTTCGACAAACACCTTACTCTCCTTCCTCAACGTACTTTTTCTTCTTCTTCCCATGCCTTCATAGCTTCCTCTTCCTTCCCTCTTTTCCCGCACCTTGCTTCCTACCCCACCTCTTTCTCTCAGTTTCGTCCACTCTCTTCATCTGCACCTGCTACATTAATGGAGGTGGTCAAAGCAATTGCTAAGCACGAACCTACAGTTCCTGAGAGTGTTGCTATCAGAGCTGATCAGAAGAGTTATAGTTACAAGCAACTTGTCTCATCGGCACAGAAGATATCCAATCTCTTGTGTGGCAGTGATGCACAGACAGGAAATCTCGGTGGAGCTCGAGTAGGAATTGTAGCCAAACCCTCCGCTGAATTTGTTGCTGGAATACTTGGGATTTGGCTTAGTGGAGGTGTTGCTGTTCCGCTTGCAACCAGCTATCCAGAAGTAGAGCTCTTGTATGTGACTAATAATTCGGATGTATCTGCAATACTGAGTACTGAAGATCATAGTGAAATAATGCAAAGCATAGCCAATAAAAGCTCTTCTCAGTTTTTTCATCTTCCACTTGTTCTCAACAAGTCTTCTGAGAAAAGCAGAGATGACCATTCGCAGAATGGGGGAATTCATACAGATAAAATTTTGTTGGATAATTTTGGAAGATTAAGTGAAGATCCAGCACTGATTTTGTACACTAGTGGGACTACAGGTAAACCTAAGGGAGTTGTTCATACACACAAAAGCATCATTTCCCAGGTCCAAACTTTGACAAAAGCATGGGAGTACACATCTGCTGATCAGTTTCTGCATTGTCTACCACTACATCATGTTCATGGGTTTTTCAATGGTTTAATGGCCCCTCTCTATGCAGGCTCCACGGTTGAGTTTTTGCCAAAATTTAGTGTGAGAGGAGTTTGGCAGAGATGGCGTGAGTCATATCCAACTGATGGTTCTAAGGCTGAAGATGCTATAACTGTGTTCACTGGAGTTCCAACTATCTATGCCCGATTGATACAAGGTTATCATGCAATGGATCCTGAGCTACAAGCTGCTTCAGTATCTGCTGCAAAGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTTCCACTACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGCTTATTGGAACGATATGGCATGACTGAATTTGTTATGGCATTGTCGAATCCATTAAAAGGTGAGCGCAAACCTGGAACTGTTGGCAAACCATTTCCCGGTATACAGGTCAAGATTATTACAGATGAAGAGAGTGTGAATGAAAATACTGGAATGGGTGAGCTTTGCTTTAAAAGCCCTTCGTTGTTTAAAGAATATTGGAAACTTCCTGAGGCAACAAAGGAATCATTTACTGATGATGGATTCTTCAAGACTGGAGATGCAGTTACTACAGATGAAGATGGATATTTCATCATTCTAGGACGTAATAATGCTGATATAATCAAGGCTGGTGGATATAAGCTTTCTGCATTAGAAATTGAATCAGTTATAATAGAGCATCCGGCTGTCTCAGAATGTTGCGTTTTAGGCCTACCAGACAAAGACTATGGAGAGATTGTTGGTGCAATCGTTGTGCCACAGGCTGATGTTAAACTGAAACGAGATCAAGAATCAAAGCCTGTTCTAAGCCTAGAAGAATTATCCACCTGGGCCAAAGACAAAATTGCACCTTACAAGATTCCAACTCAACTAATCGTGTGGGATAAACTCCCTCGCAATGCCATGGGGAAGGTAAATAAAAAAGAGCTGAAGAAGCTGCTTACCATTTGA 1806 0.4225 MSCSLKAFDKHLTLLPQRTFSSSSHAFIASSSFPLFPHLASYPTSFSQFRPLSSSAPATLMEVVKAIAKHEPTVPESVAIRADQKSYSYKQLVSSAQKISNLLCGSDAQTGNLGGARVGIVAKPSAEFVAGILGIWLSGGVAVPLATSYPEVELLYVTNNSDVSAILSTEDHSEIMQSIANKSSSQFFHLPLVLNKSSEKSRDDHSQNGGIHTDKILLDNFGRLSEDPALILYTSGTTGKPKGVVHTHKSIISQVQTLTKAWEYTSADQFLHCLPLHHVHGFFNGLMAPLYAGSTVEFLPKFSVRGVWQRWRESYPTDGSKAEDAITVFTGVPTIYARLIQGYHAMDPELQAASVSAAKNLRLMMCGSSALPLPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKPGTVGKPFPGIQVKIITDEESVNENTGMGELCFKSPSLFKEYWKLPEATKESFTDDGFFKTGDAVTTDEDGYFIILGRNNADIIKAGGYKLSALEIESVIIEHPAVSECCVLGLPDKDYGEIVGAIVVPQADVKLKRDQESKPVLSLEELSTWAKDKIAPYKIPTQLIVWDKLPRNAMGKVNKKELKKLLTI 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01874 601 CDD MCS 76 597 - -
Gma08g01874 601 Gene3D - 65 487 IPR042099 -
Gma08g01874 601 SUPERFAMILY Acetyl-CoA synthetase-like 56 598 - -
Gma08g01874 601 Gene3D - 490 600 IPR045851 -
Gma08g01874 601 PANTHER MALONATE--COA LIGASE-LIKE 5 599 - -
Gma08g01874 601 Pfam AMP-binding enzyme 74 493 IPR000873 -
Gma08g01874 601 PANTHER ACYL-COA SYNTHETASE 5 599 - -
Gma08g01874 601 Pfam AMP-binding enzyme C-terminal domain 504 589 IPR025110 -
Gma08g01874 601 ProSitePatterns Putative AMP-binding domain signature. 231 242 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01874 Gma-Chr8 16853053 16862436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01874 226 600 Monolignol Biosynthesis Gene Families AT4G19010 29.199 1.68e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01874 K18660 - gmx:100810130 1195.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01874 08 16853053 16862436 Gma08g01874 08 16853053 16862436 ECH
Gma07g00183 07 1536374 1544408 Gma08g01874 08 16853053 16862436 GST