Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01867 ATGATGGCTGGGAACCCTAACTGGTGGACTATGCATCCACCATCTTTGATCCCTCCCCAGTATGTGTTTGGATCTTCTTCAATTCCTTTTAATTCTTCTACACAAAACCAAGAGCCCCCTCAGTCATTGAGCCAACTTCTTTTCACTGGTTTACCAGGAGAGGAAGAGAGAATTGCATTCAGTCCTTTTCAATCAAAAAAGTTGGATGAATGGAATGACCAAATGCTTAATATTCCGTCCCCTATAGTTCCAATGCCTGATGTAATAAAGCAAGAGGTTTCCCAAAGTGGCAGCTTATATCACCATGGACATGATCAGGAATTTCAGGTTTCTGGGGCACCTTGGTCACATATGGTGCCAATTTCTTCTTCCCCTAGGTCTAGTGTTGCTAGCTTCAGTAGTAATAATTTATTGGATTTCACTTACAACAAGACAGATCATAGGAAGAACCAACTACCAGATACATCCGAGTGTAATAGCACAGCCACTGCTGGAGTTTACAAGAAGACTAAGAGCCAACCATCTTCAAGCCAACCACCTCTCAAGGTGAGAAAGGAGAAGCTAGGTGATAGAATAACAGCTCTTCACCAGCTAGTTTCCCCATTCGGAAAGACTGACACAGCTTCCGTCTTGTTAGAAGCCATTGGATACATAAGATTCCTTCAGGGTCAAATTGAGGCACTCAGTTCTCCTTACTTGGGCAATGGATCAAAAAACATGAGGAATCCACAGTCTCAACAGGTACACGGAGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGAATGACAATGGCCTGAAAAGAAAGGGAGCTCCAAACCAGGATGCAAAAGATAAGCCAAGCGACTTGAAGAGTAGAGGACTGTGCTTGGTTCCTGTGTCTTGTACCCAACATGTTGGAAATGAAAATGGAGCTGATTACTGGGCACCAGCATATGGAAGTGGATTTTAA 960 0.4344 MMAGNPNWWTMHPPSLIPPQYVFGSSSIPFNSSTQNQEPPQSLSQLLFTGLPGEEERIAFSPFQSKKLDEWNDQMLNIPSPIVPMPDVIKQEVSQSGSLYHHGHDQEFQVSGAPWSHMVPISSSPRSSVASFSSNNLLDFTYNKTDHRKNQLPDTSECNSTATAGVYKKTKSQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNGSKNMRNPQSQQVHGERNSVFPEDPGQLLNDNGLKRKGAPNQDAKDKPSDLKSRGLCLVPVSCTQHVGNENGADYWAPAYGSGF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01867 319 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 182 233 IPR036638 GO:0046983
Gma08g01867 319 Gene3D - 182 240 IPR036638 GO:0046983
Gma08g01867 319 MobiDBLite consensus disorder prediction 236 286 - -
Gma08g01867 319 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 221 IPR011598 GO:0046983
Gma08g01867 319 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 19 306 - -
Gma08g01867 319 CDD bHLH_AtbHLH_like 182 229 IPR045239 -
Gma08g01867 319 MobiDBLite consensus disorder prediction 236 252 - -
Gma08g01867 319 PANTHER OS05G0228400 PROTEIN 19 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01867 Gma-Chr8 16806051 16809433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01867 137 263 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 60.741 2.40e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01867 - - gmx:100806379 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01867 08 16806051 16809433 Gma08g01867 08 16806051 16809433 ECH