Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01838 ATGGGGAAAGCTAGCAGGTGGTTGAAGGGGTTGTTGGGGATGAAGAAGGAGAAGGACCACAGTGACAATTCAGGCTCATTGGCTCCTGACAAGAAGGAGAAGAAAAGGTGGAGTTTTGCCAAGCCACCACCTTCTTCAGTTCCTGCCACTGATAACAACAACACCTGGCTCAGATCCTATATTTCTGAGACAGAGAATGAGCAGAACAAGCATGCAATTGCCGTGGCAGCCGCCACCGCTGCTGCTGCCGATGCCGCCGTGGCCGCCGCACAGGCGGCCGTGGCTGTTGTGAGGCTCACAAGCCAGGGGAGAGGGGCATTGTTCAGTGGAAGCAGGGAGAAATGGGCTGCTGTGAAGATCCAAACTTTTTTTAGAGGCTACTTGGCACGGAAGGCTCTTAGAGCACTGAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGGTATTTGGTTAGAAAGAGGGCTGCTGCAACTCTTCACAGTATGCAAGCTCTAATAAGAGCTCAAACTGCTGTTAGAACACAGCGAGCTCGTCGTTCCATGAGCAAAGAAGACAGATTTCTACCTGAAGTTCTTGCAAGAAAACCTGTGGAACGATTTGATGAAACAAGGAGTGAATTCCACAGTAAAAGGCTACCTACATCCTATGAAACATCCTTGAATGGTTTTGATGAGAGCCCCAAGATTGTTGAAATTGACACATACAAGACTCGATCGAGGTCTAGGCGCTTCACCTCTACAATGTCTGAGTGTGGAGAAGACATGTCCTGCCATGCAATCTCATCCCCTCTTCCTTGTCCGGTCCCCGGTCGAATCTCGGTTCCTGATTGCAGACACATTCAAGATTTTGATTGGTACTACAACGTGGATGAGTGTAGATTCTCCACTGCTCATAGCACCCCGCGTTTCACAAACTATGTGAGGGCTAATGCTCCAGCTACACCAGCCAAGAGTGTTTGTGGAGACACTTTCTTCAGACCTTGCTCCAATTTCCCCAACTACATGGCCAATACTCAGTCATTCAATGCAAAACTAAGGTCTCACAGTGCTCCAAAGCAAAGACCTGAACCCAAGAAAAGGCTCTCACTCAATGAAATGATGGCAGCAAGAAACAGCATAAGTGGTGTTAGAATGCAAAGGCCATCATCCAATTTCTTCCAGACTCAAGAAGAATCCTGGAATTTTTTACAATCACAAGGAATATTTGAGAGGCAATTGGAGTCTAAATGA 1230 0.4724 MGKASRWLKGLLGMKKEKDHSDNSGSLAPDKKEKKRWSFAKPPPSSVPATDNNNTWLRSYISETENEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGALFSGSREKWAAVKIQTFFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQTAVRTQRARRSMSKEDRFLPEVLARKPVERFDETRSEFHSKRLPTSYETSLNGFDESPKIVEIDTYKTRSRSRRFTSTMSECGEDMSCHAISSPLPCPVPGRISVPDCRHIQDFDWYYNVDECRFSTAHSTPRFTNYVRANAPATPAKSVCGDTFFRPCSNFPNYMANTQSFNAKLRSHSAPKQRPEPKKRLSLNEMMAARNSISGVRMQRPSSNFFQTQEESWNFLQSQGIFERQLESK 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01838 409 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Gma08g01838 409 Pfam Protein of unknown function (DUF4005) 301 374 IPR025064 -
Gma08g01838 409 PANTHER PROTEIN IQ-DOMAIN 14-LIKE 1 384 - -
Gma08g01838 409 ProSiteProfiles IQ motif profile. 137 164 IPR000048 GO:0005515
Gma08g01838 409 SMART iq_5 135 156 IPR000048 GO:0005515
Gma08g01838 409 SMART iq_5 112 134 IPR000048 GO:0005515
Gma08g01838 409 Gene3D - 56 138 - -
Gma08g01838 409 MobiDBLite consensus disorder prediction 1 53 - -
Gma08g01838 409 PANTHER IQ-DOMAIN 5-RELATED 1 384 - -
Gma08g01838 409 MobiDBLite consensus disorder prediction 10 39 - -
Gma08g01838 409 Pfam IQ calmodulin-binding motif 140 154 IPR000048 GO:0005515
Gma08g01838 409 Pfam IQ calmodulin-binding motif 115 134 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01838 Gma-Chr8 16495056 16496852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01838 1 378 IQD Protein Family AT3G16490 54.847 1.04e-109 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01838 - - gmx:100782699 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01838 08 16495056 16496852 Gma08g01838 08 16495056 16496852 ECH
Gma07g00142 07 1192929 1194851 Gma08g01838 08 16495056 16496852 GST
Gma13g03166 13 45782604 45784257 Gma08g01838 08 16495056 16496852 PCT
Gma15g00199 15 1626806 1628463 Gma08g01838 08 16495056 16496852 PCT
Gma08g01838 08 16495056 16496852 Gma13g03166 13 45782604 45784257 PCT
Gma08g01838 08 16495056 16496852 Gma15g00199 15 1626806 1628463 PCT