Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma08g01838 | ATGGGGAAAGCTAGCAGGTGGTTGAAGGGGTTGTTGGGGATGAAGAAGGAGAAGGACCACAGTGACAATTCAGGCTCATTGGCTCCTGACAAGAAGGAGAAGAAAAGGTGGAGTTTTGCCAAGCCACCACCTTCTTCAGTTCCTGCCACTGATAACAACAACACCTGGCTCAGATCCTATATTTCTGAGACAGAGAATGAGCAGAACAAGCATGCAATTGCCGTGGCAGCCGCCACCGCTGCTGCTGCCGATGCCGCCGTGGCCGCCGCACAGGCGGCCGTGGCTGTTGTGAGGCTCACAAGCCAGGGGAGAGGGGCATTGTTCAGTGGAAGCAGGGAGAAATGGGCTGCTGTGAAGATCCAAACTTTTTTTAGAGGCTACTTGGCACGGAAGGCTCTTAGAGCACTGAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGGTATTTGGTTAGAAAGAGGGCTGCTGCAACTCTTCACAGTATGCAAGCTCTAATAAGAGCTCAAACTGCTGTTAGAACACAGCGAGCTCGTCGTTCCATGAGCAAAGAAGACAGATTTCTACCTGAAGTTCTTGCAAGAAAACCTGTGGAACGATTTGATGAAACAAGGAGTGAATTCCACAGTAAAAGGCTACCTACATCCTATGAAACATCCTTGAATGGTTTTGATGAGAGCCCCAAGATTGTTGAAATTGACACATACAAGACTCGATCGAGGTCTAGGCGCTTCACCTCTACAATGTCTGAGTGTGGAGAAGACATGTCCTGCCATGCAATCTCATCCCCTCTTCCTTGTCCGGTCCCCGGTCGAATCTCGGTTCCTGATTGCAGACACATTCAAGATTTTGATTGGTACTACAACGTGGATGAGTGTAGATTCTCCACTGCTCATAGCACCCCGCGTTTCACAAACTATGTGAGGGCTAATGCTCCAGCTACACCAGCCAAGAGTGTTTGTGGAGACACTTTCTTCAGACCTTGCTCCAATTTCCCCAACTACATGGCCAATACTCAGTCATTCAATGCAAAACTAAGGTCTCACAGTGCTCCAAAGCAAAGACCTGAACCCAAGAAAAGGCTCTCACTCAATGAAATGATGGCAGCAAGAAACAGCATAAGTGGTGTTAGAATGCAAAGGCCATCATCCAATTTCTTCCAGACTCAAGAAGAATCCTGGAATTTTTTACAATCACAAGGAATATTTGAGAGGCAATTGGAGTCTAAATGA | 1230 | 0.4724 | MGKASRWLKGLLGMKKEKDHSDNSGSLAPDKKEKKRWSFAKPPPSSVPATDNNNTWLRSYISETENEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGALFSGSREKWAAVKIQTFFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQTAVRTQRARRSMSKEDRFLPEVLARKPVERFDETRSEFHSKRLPTSYETSLNGFDESPKIVEIDTYKTRSRSRRFTSTMSECGEDMSCHAISSPLPCPVPGRISVPDCRHIQDFDWYYNVDECRFSTAHSTPRFTNYVRANAPATPAKSVCGDTFFRPCSNFPNYMANTQSFNAKLRSHSAPKQRPEPKKRLSLNEMMAARNSISGVRMQRPSSNFFQTQEESWNFLQSQGIFERQLESK | 409 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma08g01838 | 409 | ProSiteProfiles | IQ motif profile. | 113 | 141 | IPR000048 | GO:0005515 | |
Gma08g01838 | 409 | Pfam | Protein of unknown function (DUF4005) | 301 | 374 | IPR025064 | - | |
Gma08g01838 | 409 | PANTHER | PROTEIN IQ-DOMAIN 14-LIKE | 1 | 384 | - | - | |
Gma08g01838 | 409 | ProSiteProfiles | IQ motif profile. | 137 | 164 | IPR000048 | GO:0005515 | |
Gma08g01838 | 409 | SMART | iq_5 | 135 | 156 | IPR000048 | GO:0005515 | |
Gma08g01838 | 409 | SMART | iq_5 | 112 | 134 | IPR000048 | GO:0005515 | |
Gma08g01838 | 409 | Gene3D | - | 56 | 138 | - | - | |
Gma08g01838 | 409 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
Gma08g01838 | 409 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 384 | - | - | |
Gma08g01838 | 409 | MobiDBLite | consensus disorder prediction | 10 | 39 | - | - | |
Gma08g01838 | 409 | Pfam | IQ calmodulin-binding motif | 140 | 154 | IPR000048 | GO:0005515 | |
Gma08g01838 | 409 | Pfam | IQ calmodulin-binding motif | 115 | 134 | IPR000048 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma08g01838 | Gma-Chr8 | 16495056 | 16496852 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma08g01838 | 1 | 378 | IQD Protein Family | AT3G16490 | 54.847 | 1.04e-109 | 326 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma08g01838 | - | - | gmx:100782699 | 755.362 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma08g01838 | 08 | 16495056 | 16496852 | Gma08g01838 | 08 | 16495056 | 16496852 | ECH | |
Gma07g00142 | 07 | 1192929 | 1194851 | Gma08g01838 | 08 | 16495056 | 16496852 | GST | |
Gma13g03166 | 13 | 45782604 | 45784257 | Gma08g01838 | 08 | 16495056 | 16496852 | PCT | |
Gma15g00199 | 15 | 1626806 | 1628463 | Gma08g01838 | 08 | 16495056 | 16496852 | PCT | |
Gma08g01838 | 08 | 16495056 | 16496852 | Gma13g03166 | 13 | 45782604 | 45784257 | PCT | |
Gma08g01838 | 08 | 16495056 | 16496852 | Gma15g00199 | 15 | 1626806 | 1628463 | PCT |