Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01830 ATGCATATCCAAAGGAACAAAAATATTATTAAGATGATCAACATTATTGGAGCACTTGTTCTACTCTTTGCATTTCTCTTCCTCAGTTGTGTGTATGCACAAGACACAACAACCCTTGTGCCTGCAATCATAACTTTTGGTGATTCTGCTGTGGATGTAGGGAACAATGACTATCTTCCCACCCTTTTCAAGGCTGATTACCCTCCTTATGGGAGGGACTTTGTTAACCACCAACCTACTGGGAGGTTTTGCAATGGCAAATTAGCTACTGATTTCACTGCTGACACATTGGGTTTCAAGACCTATGCTCCAGCATATCTTAGCCCACATGCATCAGGGAAAAACCTCCTTATTGGAGCAAACTTTGCTTCAGCTGCATCTGGTTATGATGAAAATGCTGCTACTTTGAATCACGCGATTCCGTTGTCCCAACAGTTGAGTTATTTCAAGGAATACCAAGGCAAGCTGGCCAAGGTAGCTGGCAGTAAAAAAGCAGCCTCAATCATCAAGGATGCGTTGTATGTGCTCAGTGCTGGAAGCAGTGACTTTGTGCAAAATTATTATGTCAATCCTTGGATCAACAAAGTCTACACTCCTGATCAGTATTCGTCCTACTTAATTGGTTCATTCTCAAGTTTTGTTAAGGACTTGTATGGATTGGGAGGCAGGAGACTTGGAGTGACTTCACTCCCACCATTGGGTTGCCTACCTGCTGCAAGGACTATATTTGGTTTCCATGAGAATGGTTGTGTCTCAAGAATCAACACTGATGCTCAAGGATTTAACAAGAAGCTCAACTCAGCTGCAACGAGTCTTCAAAAGCAACTTCCTGGTCTTAAGATTGCGGTTTTCGACATTTACAAGCCTCTCTATGACCTTGTTCAATCCCCTTCAAAATCTGGTTTTGTGGAGGCAAACAGAGGATGCTGTGGTACCGGGACTGTAGAGACAACATCCTTGTTGTGTAATCCAAAATCACCAGGAACTTGTTCTAATGCCACACAGTATGTGTTTTGGGACAGTGTCCATCCTTCACAAGCTGCTAACCAAGTTCTAGCTGATGCATTAATTCTACAAGGCATATCTCTTGTCACATAA 1098 0.4262 MHIQRNKNIIKMINIIGALVLLFAFLFLSCVYAQDTTTLVPAIITFGDSAVDVGNNDYLPTLFKADYPPYGRDFVNHQPTGRFCNGKLATDFTADTLGFKTYAPAYLSPHASGKNLLIGANFASAASGYDENAATLNHAIPLSQQLSYFKEYQGKLAKVAGSKKAASIIKDALYVLSAGSSDFVQNYYVNPWINKVYTPDQYSSYLIGSFSSFVKDLYGLGGRRLGVTSLPPLGCLPAARTIFGFHENGCVSRINTDAQGFNKKLNSAATSLQKQLPGLKIAVFDIYKPLYDLVQSPSKSGFVEANRGCCGTGTVETTSLLCNPKSPGTCSNATQYVFWDSVHPSQAANQVLADALILQGISLVT 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01830 365 Pfam GDSL-like Lipase/Acylhydrolase 43 355 IPR001087 GO:0016788
Gma08g01830 365 Gene3D SGNH hydrolase 32 360 IPR036514 -
Gma08g01830 365 SUPERFAMILY SGNH hydrolase 43 356 - -
Gma08g01830 365 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 30 - -
Gma08g01830 365 PANTHER GDSL ESTERASE/LIPASE EXL3 13 364 - -
Gma08g01830 365 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 13 364 - -
Gma08g01830 365 CDD SGNH_plant_lipase_like 41 357 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01830 Gma-Chr8 16414493 16416910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01830 39 354 Acyl Lipid Metabolism Gene Families AT4G10950 32.075 1.09e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01830 - - gsj:114422362 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01830 08 16414493 16416910 Gma08g01830 08 16414493 16416910 ECH
Gma07g00135 07 1131008 1134049 Gma08g01830 08 16414493 16416910 GST
Gma13g03161 13 45751195 45756172 Gma08g01830 08 16414493 16416910 PCT
Gma15g00205 15 1663826 1665187 Gma08g01830 08 16414493 16416910 PCT
Gma08g01830 08 16414493 16416910 Gma13g03161 13 45751195 45756172 PCT
Gma08g01830 08 16414493 16416910 Gma15g00205 15 1663826 1665187 PCT