Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01829 ATGACTATCCTCATTGAGCAATCTGATCACTTTGGGGCTGAAGTAGAGGCAAAGACTGAACCAATAAATGAGAGAGAACTGGTGTTGGATGGTGGATTTCTGATAACACAGACCAACTCATTTGGGCACATGTTTAGGGCTTATAATGATGCTGAAAGTGAGAGGCATGAAGGAGTGGAGAACTTCTACAGAAAAAATCACACTTACCAATCAATTGATTTCGTGAAGAAAATGAGAGAGGAGTACGCAAAATTGAACAGGGTAGAGATGAGCATATGGGAATGTTGTGAACTCCTTAATGAAGTGGTGGATGAGAGTGACCCTGACTTGGATGAACCTCAGATTGAACACTTGCTCCAGACAGCCGAAGCTATAAGGAGGGACTACCCTGATGAAGATTGGTTGCACCTAACTGGCCTTATCCATGATCTTGGCAAGGTGCTGAATTTGCCTAGTTTTGGAGGACTTCCTCAATGGGCTGTAGTAGGGGACATATTCCCTGTTGGTTGCAGATTTGATGAGTCCATTGTTCACCACAAGTATTTTAAGGAAAATCCAGACTACAACAATCCAGCATACAACACTAAATATGGGATTTACTCAGAGAGATGTGGACTTAACAATGTGATGATGTCATGGGGACACGATGACTACATGTATCTAGTGGCAAAGGAGAATGATACTACACTGCCCTCTGCGGCTTTGTTCATTATAAGATACCATTCATTCTATGCATTACATAAGGAAGGAGCCTATAAGCACTTGATGAATGATGAGGATTTTGAGAATCTGAAATGGCTCCATATTTTCAACAAATATGACCTTTACAGCAAGAGCAAAATTCGAATTGATGTTGAAAGGGTCAGACCGTACTATCTGTCCCTCATTGAAAAGTACTTCCCTGCAAAGCTGAAGTGGGTGCATCAAGTTTTTGATAACATGGAAAGAGAAACACGACGGATTGTCATCTTAAACGTATGGGCATGGCTTGCCTTGGTTTCACTTTTCACTATTCATACCAATTCAGCACTAGAAAATAACAACCCCGGTTTCATAAGCATTGATTGTGGATCAGAAGCAGCTTATTCCCACACCGAAACTGGAATTTGGTTTGAGACAGACAATGATTATGTTGGAACAGGAAGCAATCATATGGTTTCATCGAATGTGAACTTAAACTATCGCGATTATGGGAGACAGTTGAACACACTGAGATGCTTCCCAAAAGGAGAGAGGAACTGCTACACCCTGAAACCACAGCATGGTAAAAATAACAGTAGCAAGTATCTCATAAGGGCTTTCTTTTCATATGGAAACTATGATGGCAAAAATGAAGCTCCTTCTTTTGACATGTACATTGGAGTCAATCTTGTGGACAAAGTTAATCTCACTGATTACGCCGACACTTACTGGTTCACGGAGATTATTCAGACTGTGTCAAGTGAAAGCATAGATGTGTGCCTTGTTAAAAGTGGCCCCACAATCCCTTGCATTGCTTCATTGGAATTGAGACCTTTGAACACTTCCATTTATCACACTCCCACCGCTGCTCCACAACCACTATTATATCTTCAGCTAAGGATTGACGTTGGCTCCTCTGCATTGcCTCCACCTTATGGAGACTATTACTTTAGGTACAAAGATGACGTGTATGATCGGATATGGCGGTGTGACCTCGATGATACGAATGGTTGGTATCCCTTGGTTATGGAATCTCTTAACTTGGACAGTGGAAGAAGAAGCAGTGATATTTATAAGTTGCCCTCCCAAGTACTAAGAACTGCAGTCCAATCTCCAAACGTCTCGCACCCTTTACAATTTGACTATGACAATCTTTATGCGCCCCTGGACAAACCTTATGAGTACTACGTCTACTTTCACTTTCTTGAAATTCAGCAACTTCCCATTGGTAAAAAAAGAATCATTAATATCACCCTTAACTACCAAACCATTCTCACACAACCTTTGGTTCTTGAATACCTCAAGCCTGTCACCATTGCGCCTCAAAAAACAAGTTCTGGTTCTGTCTTGTTCAATGTTAGTGCCACGTCAGAATCGGATGCTCCACCTATCCTCAACGCCTTCGAGGTCTATAAGTTGATAACACAACTTGATTTGCCCACACAGGCTAGAGATGttggtgctattgtggacatcaaaagtgcgtaccagatctctagattgaattggcaaggagacccatgtgttccaaagcaatatgcatgggatggtctcatttgcagctcctacaacaccgttccaagaatcacatctttGAACCTGAGCTCAAGCAATCTGAAGGGGCAGATAAATATGTCATTCTCATACCTTACCGAACTAGAAATCCTGGATTTGTCACAAAACGAACTGGAAGGATCTTTACCAGAATTTCTGGCACAATTGCCAAAGTTAAAAATTCTTAATGTGACAGGGAACAAGCTTTCGGGTCCAATTCCTAAGGCTCTCAAGGAAAAGGCAGATTTGCAATTAAGTGTTGAGGGAAATCCATATCTTTGCACCTCTAGTACGTGCCGCAAGAGAAAGAAGGTAGTAATTCCGTTGGTAGTAACATTTGTGGGAGCCTTCATCATTCTTTCGATAGTATCACTTTCTTTTTTAAGAAGACGACGACTACAAGGTGTCATGGGTACGAAGAAGCTGAGTTGTTTCAACAAAATTGAGTATGTGAACTCAAATAAACAAGAATTCACCTACGCAGAGGTTCtaagcatcaccaataactttgagaaggttgtgggtaaaggagcatatggaactgtctactatggtttcaaaggtgaaacacaagtagcagtgaagattctctctccctcaactcaaggttttcagcaatttcagacagaggcaaaaattctcactagagtacaccatacatgcttgactcctctaattggatattgcaatgaagccacggcgctcatatataaatacatggcctacggagacttggCAAACCATCTTTCAGATAAAAACCAAATTTTGCTAAGTTGGAAACAGAGACTTCAAATTGCTCTGGATTCAGCAACAGggttggagtatctgcataaatattGGCACCCTGCTATCTTGAAAACCCACGAGAATACTCACATAGTTCAGTGGGTAAATTCCATGTTAGCTGATGAAGGAGAAATTGATAGTATTATGGATCCAAGGTTACAGGGAATATATGACTCTGAGACTGCATCGAAAGTTGTACATGTTGCAATGGCTTGTCTAGCTCCGAGTTCTATTAAGAGGCCAACAATGGATCAAGTGGTCAAAGAATTAAAACAATGTTTTCCCATGGAGAATATTGATGATAGTATATGTATATTCACTGAATTCTCTGTGGCATCAATTAGCGGAGAGAGTTCTCTAGCGAGGTAG 3390 0.3608 MTILIEQSDHFGAEVEAKTEPINERELVLDGGFLITQTNSFGHMFRAYNDAESERHEGVENFYRKNHTYQSIDFVKKMREEYAKLNRVEMSIWECCELLNEVVDESDPDLDEPQIEHLLQTAEAIRRDYPDEDWLHLTGLIHDLGKVLNLPSFGGLPQWAVVGDIFPVGCRFDESIVHHKYFKENPDYNNPAYNTKYGIYSERCGLNNVMMSWGHDDYMYLVAKENDTTLPSAALFIIRYHSFYALHKEGAYKHLMNDEDFENLKWLHIFNKYDLYSKSKIRIDVERVRPYYLSLIEKYFPAKLKWVHQVFDNMERETRRIVILNVWAWLALVSLFTIHTNSALENNNPGFISIDCGSEAAYSHTETGIWFETDNDYVGTGSNHMVSSNVNLNYRDYGRQLNTLRCFPKGERNCYTLKPQHGKNNSSKYLIRAFFSYGNYDGKNEAPSFDMYIGVNLVDKVNLTDYADTYWFTEIIQTVSSESIDVCLVKSGPTIPCIASLELRPLNTSIYHTPTAAPQPLLYLQLRIDVGSSALPPPYGDYYFRYKDDVYDRIWRCDLDDTNGWYPLVMESLNLDSGRRSSDIYKLPSQVLRTAVQSPNVSHPLQFDYDNLYAPLDKPYEYYVYFHFLEIQQLPIGKKRIINITLNYQTILTQPLVLEYLKPVTIAPQKTSSGSVLFNVSATSESDAPPILNAFEVYKLITQLDLPTQARDVGAIVDIKSAYQISRLNWQGDPCVPKQYAWDGLICSSYNTVPRITSLNLSSSNLKGQINMSFSYLTELEILDLSQNELEGSLPEFLAQLPKLKILNVTGNKLSGPIPKALKEKADLQLSVEGNPYLCTSSTCRKRKKVVIPLVVTFVGAFIILSIVSLSFLRRRRLQGVMGTKKLSCFNKIEYVNSNKQEFTYAEVLSITNNFEKVVGKGAYGTVYYGFKGETQVAVKILSPSTQGFQQFQTEAKILTRVHHTCLTPLIGYCNEATALIYKYMAYGDLANHLSDKNQILLSWKQRLQIALDSATGLEYLHKYWHPAILKTHENTHIVQWVNSMLADEGEIDSIMDPRLQGIYDSETASKVVHVAMACLAPSSIKRPTMDQVVKELKQCFPMENIDDSICIFTEFSVASISGESSLAR 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01829 1129 Gene3D Ribonuclease Inhibitor 715 841 IPR032675 -
Gma08g01829 1129 SUPERFAMILY HD-domain/PDEase-like 50 306 - -
Gma08g01829 1129 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 338 1030 - -
Gma08g01829 1129 Pfam Malectin-like domain 354 699 IPR024788 -
Gma08g01829 1129 SUPERFAMILY L domain-like 740 825 - -
Gma08g01829 1129 ProSiteProfiles Protein kinase domain profile. 913 1129 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01829 1129 SUPERFAMILY Protein kinase-like (PK-like) 895 1097 IPR011009 -
Gma08g01829 1129 PANTHER OS07G0107800 PROTEIN-RELATED 1030 1096 - -
Gma08g01829 1129 Pfam Protein tyrosine and serine/threonine kinase 915 1023 IPR001245 GO:0004672|GO:0006468
Gma08g01829 1129 ProSitePatterns Protein kinases ATP-binding region signature. 919 940 IPR017441 GO:0005524
Gma08g01829 1129 Gene3D Transferase(Phosphotransferase) domain 1 985 1027 - -
Gma08g01829 1129 Gene3D Transferase(Phosphotransferase) domain 1 1028 1112 - -
Gma08g01829 1129 Gene3D Phosphorylase Kinase; domain 1 900 984 - -
Gma08g01829 1129 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 1030 1096 - -
Gma08g01829 1129 Pfam Leucine rich repeat 754 814 IPR001611 GO:0005515
Gma08g01829 1129 Pfam Myo-inositol oxygenase 57 306 IPR007828 GO:0005506|GO:0005737|GO:0019310|GO:0050113
Gma08g01829 1129 PANTHER OS07G0107800 PROTEIN-RELATED 338 1030 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01829 Gma-Chr8 16392467 16407970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01829 975 1099 Receptor kinase-like Gene Family AT2G19210 35.606 1.43e-10 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gma08g01829 Malectin_like 4.1e-79 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01829 K00469 - gmx:100781084 1447.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01829 08 16392467 16407970 Gma08g01829 08 16392467 16407970 ECH
Gma07g00131 07 1112804 1117382 Gma08g01829 08 16392467 16407970 GST