Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01828 ATGGCGACGGCGCCGGGAAATCAAATGTTGGAGGGCGGAGGAGGAGCGCCGCAGCCTCCGGGTACAGACATGACCGGAATATGCTTCCGGGATCAGCTCTGGCTCAATAGCTTCCCTCTGGATCGCAACTTGGTCTTCGATTACTTCGCACTCTCCCCTTTCTACGACTGGACCTGCAACAACGAGCAGCTCCGCATGCGCTCCGTTCACCCCCTCGACATCTCTCAACTCTCGAAAATGACGGGGACGGAGTATATGCTCAGCGAAGTTATGGAGCCGCACCTGTTTGTCATTCGCAAGCAGAAGAGAGATAGCCCCGACAAAGTTACACCTATGCTCGCGTATTACGTCCTCGATGGTTCCATTTACCAGGCACCGCAACTGTGCAATGTTTTTGCCGCCAGAATTGGAAGGGCCCTTTATTACATACAAAAGGCTTTTACTACAGCTGCCTCAAAGTTGGAGAAGATTGGATATGCTGGGTCAGCTGATTCTGAAAATGAGACTGCATTGCTGGAATCAAAGACTGCTAAGGAGACAATTGACATAAAGGAAGTTAAGCGAGTTGATCATATTCTTGCATCCTTGCAACGCAAGTTACCACCAGCTCCTCCTCCACCACCATTTCCAGAAGGTTATGTTCCACCTCCAACTGCAGAAACGGAGAAAGGCACTGAAACTCAAGAAGCAGCAGAAACGCAAGCTCCTACTGCTGATCCGATAATTGATCAAGGACCAGCAAAAAGAATGAAATTTTGA 759 0.4954 MATAPGNQMLEGGGGAPQPPGTDMTGICFRDQLWLNSFPLDRNLVFDYFALSPFYDWTCNNEQLRMRSVHPLDISQLSKMTGTEYMLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYAGSADSENETALLESKTAKETIDIKEVKRVDHILASLQRKLPPAPPPPPFPEGYVPPPTAETEKGTETQEAAETQAPTADPIIDQGPAKRMKF 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01828 252 Gene3D Mediator complex, subunit Med6 21 150 IPR038566 -
Gma08g01828 252 MobiDBLite consensus disorder prediction 199 215 - -
Gma08g01828 252 PIRSF MED6_meta/plant 14 252 IPR016820 GO:0003712|GO:0006357|GO:0016592
Gma08g01828 252 PANTHER MED-6-RELATED 15 252 IPR007018 GO:0003712|GO:0006357|GO:0016592
Gma08g01828 252 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 6 15 252 - -
Gma08g01828 252 MobiDBLite consensus disorder prediction 197 252 - -
Gma08g01828 252 MobiDBLite consensus disorder prediction 1 22 - -
Gma08g01828 252 Pfam MED6 mediator sub complex component 27 152 IPR007018 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01828 Gma-Chr8 16380405 16384473 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Gma08g01828 Med6 7.8e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01828 K15128 - gmx:100792248 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01828 08 16380405 16384473 Gma08g01828 08 16380405 16384473 ECH
Gma07g00130 07 1102918 1106171 Gma08g01828 08 16380405 16384473 GST