Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01825 atgggaatgttattgcagtttctttatgtattgtttggggtacttatttctgtggttctggttcaagcacaggatcaatcaggattcattagcattgattgtggtctacctgaatcctcaagctatactgagaagaccacaagcatattttacatttcagatgccaaatttatagatgctggtgtaagcaagagtatttcaccagcagagaagagtactcatctacaacagctagcatatgtgaggagttttcctagtggagagagaaactgttacagaataaatgtaaccagtggtactaaatatttgatcagagctactttcttttatggaaactatgatggcctcaatcagccaccacaatttgatcttcatcttggacctaatttatgggacacagtgagcttccccaatgcatcactcagcgaaatcagtgagatcatttacaccccatcactagattacatacatccatgtcttgttaacaaaggtcaaggggctccattcatttcaaccatagaattgaggactttgaaaaatgcttcctatgtcacagcgtcagctgaatcattggcatactatcggcgatatgatttaggttccatcaccaacttagtatacaggtacaactatgatgtttatgaccgcatctgggtgccacatggattcaaccagtggacacaattaagcagcacacttaatcttgatatattccagaatgattacaaattaccagaagttgtcatgagcactgctgctacaccaataaatgctagtgctccatttcagttctattgggatccagataatgtgaatgagaaattctacatctacatgcactttaacgaggttaaaattctagcagaaaatgaaactagaacattcaatatcttcatgaatggcaagttattctatggacctctgactcctggatatctgacgacaaatatcatatatagtacatcagctttgaccggagctacaaggtatctattttctcttgctaagacagggacttctacccttccacccatcatgaatgccatggagatttataaagtaatagattttgcacaatcagaaactgaacaagatgatgttgatgctatcacaaacatcaaaaacgcttatggggtggatagaaattggcaaggagatccatgtggcccagtagcatacatttgggaaggtctaaattgtagttatgataacaccccaagaatcacatccttgaatttgtcttcaagtggactgaccggacagatattatctttcatctccgagctcactatgttacagtatttggatttatcaaacaatagtttaagcgggtcagtacctgattttctgacacaactgcaatcacttaaagtcttAAATATAGGAGGGAATAAGCTATCGGGGTCAATTCCTGCAAAACTAATTGAGAGATCAAAGAATGGGTCACTAATATTAAGTGTTGATGGAAATCAAAATCTTTGCACCTCGACTCCATGCCACAAGAGAAACAGGGTTGTAATTCCGTTGGTAGTAACACTTGTGGGAGCCTTCATCCTTTTGGCAGTATCATTATTTGTTTTTAGAAGAGTACAAGTTGTTGTGAGTATGAAGAAGTTGAAGTTTTCCAACAAAATGGAATATGTAGACTCGAAGAAACAAGAGTTCAGCTACTCAGAGGTTCAAAGTattacgaataattttgagagggttgtgggtaaaggaggatttggaactgtctactatggttgcataggtgaaacacaagtagccgtgaagatgctctctcattcaactcaaggtgttcagcaatttcagacagaggcaaatattctcacaagagtacaccatagatgctttactccacttattggatattgcaatgaaggcaccagaacagcactcatctatgaatacatgaccaacggagacctagctgagaagctatcagGTCAAAGTCAAACATTCTTAGGTTGGGAACAGAGATTTCAAATTGCTTTGGACTCTGCAATAGgcttggagtaccttcattatggttgcaagcccccaattattcacagagatgttaagactagaaatattttactcgacaagaatctccgcgccaaaatatctgattttggattgtcaagaatcttttcagatgatggtgacacccatgtatcaacagcaattgcaggcaccccaggataccttgacccagagtacagcatatcaagcagattgacagagaaaagtgatgtttacagcttcggagttgttcttttggagatggtcacagATAGTATGAGGAGCGCACTGGTATGGATTTTTACCTTGAACGTTTGCCTTCAAATTTTATTTATTCCTGGTGGTGACTCAAAGCCGCATCCACGTTTCAGAGAGAAAATCACTGAGGATTACAATCCCGGATTTATAAGCATTGACTGTGGAGCAAGTAACGATTACGTGGACGAGGAAACAAGTATCTTTTATAAGACAGACACAGATTTCATAGAAACGGGAGAAAACTTGTTGGCGTCTTCCCAATTTATTGACATAAATATCCCTGGTTTTGGAAGacaactacgcacattgagaagcttccctgagggaaataggaactgttatactctgaagcccgagtataagcaaggtgaacagcaaagttatctgattcgggctatgttcggatatggaaactacgatggaaaaaatcatccccctacgttcgatctctatcttggGGTCAACTACTGGATAAATGTTAACCCGGCAAAATATTCCTATCTTTGGACGGAGATTATTCATGCTCCCACAACAGACACCATACAAGTGTGTCTGGTTAATATTGACACTGGTACACCTTTCATTTCGTCATTAGAGTTACGACCTTTAAGCACTTCCATTTACCAAATCATGTCACAATCATATCTACACCTCCGGGGGCGGTTTGATGTCGGTGGCCCTGTTGAAACCTATTATAAAAGGTACAAGGACGATATCTATGATCGCATGTGGTACTCGCCCGATGTTAAAGATTGGTATAAGATCAATACAACCATAGATGTTAATAAATCTGGCAATGATATTTATAAAGTACCAGCTGAAGTCTTGAAAACCGCAGTGCAGTCCTTCAATCGCTCATATGACTTGTACTATGACTATGAAATTGAATGGAATGTTTCCTTGAACAAGGATTCCAGATATTGTGTCTACTTTCACTTTGCTGAAATTCAAAAGCTTGCTCCAGGGCTCAGAAGGATAATCAACATCACTCTCAATGATGAAAACATACTCTCTGAGCCTATAATTCTCGAATATATGAAGCCTGTCACTATTAGTAACAAAAATGCAACTCAAGGTTTCGTTCGCTTTTCAATTAGAGCAACTGCAGAATCGGATGCTCCCCCAATTCTCAATGCTTTTGAGGTTTATGCATTAATAACAGATCTAAATTCACCAACAGATAttaaagatgttgatgccatggagaacatcaaacgctactatgggatatccagaatagattggcaaggggacccatgtgttccagaaatattcagatggagtggcctggactgcagctacggcatcaatcctagaatcatatcattGAACCTTAGCTCAAGCAAACTAGGAGGGGAGATAGCCGCTTCAGTCTCAGATCTTTCAGAACTACAGTCCCTggatgtctcagataacagtttaaatggttttgtgcccgagtcattatctcaacttgagtacctgaggattttaaatataggagggaataagctatccgggtcaattcctgcaaaactaattgagagatcaaagaatgggtcactaatattaagTGTTGATGGAAATCAAAATCTTTGCACCTCGACTCAATGCCACAAGAGAAACAGGGTTGTAATTCCGTTGGTAGTAACACTTGTGGGAGCCTTCATCCTTTCGGCAGTATCACTATTTGTTTTTAGAAGAGTACAAG 3955 0.1575 MGMLLQFLYVLFGVLISVVLVQAQDQSGFISIDCGLPESSSYTEKTTSIFYISDAKFIDAGVSKSISPAEKSTHLQQLAYVRSFPSGERNCYRINVTSGTKYLIRATFFYGNYDGLNQPPQFDLHLGPNLWDTVSFPNASLSEISEIIYTPSLDYIHPCLVNKGQGAPFISTIELRTLKNASYVTASAESLAYYRRYDLGSITNLVYRYNYDVYDRIWVPHGFNQWTQLSSTLNLDIFQNDYKLPEVVMSTAATPINASAPFQFYWDPDNVNEKFYIYMHFNEVKILAENETRTFNIFMNGKLFYGPLTPGYLTTNIIYSTSALTGATRYLFSLAKTGTSTLPPIMNAMEIYKVIDFAQSETEQDDVDAITNIKNAYGVDRNWQGDPCGPVAYIWEGLNCSYDNTPRITSLNLSSSGLTGQILSFISELTMLQYLDLSNNSLSGSVPDFLTQLQSLKVLNIGGNKLSGSIPAKLIERSKNGSLILSVDGNQNLCTSTPCHKRNRVVIPLVVTLVGAFILLAVSLFVFRRVQVVVSMKKLKFSNKMEYVDSKKQEFSYSEVQSITNNFERVVGKGGFGTVYYGCIGETQVAVKMLSHSTQGVQQFQTEANILTRVHHRCFTPLIGYCNEGTRTALIYEYMTNGDLAEKLSGQSQTFLGWEQRFQIALDSAIGLEYLHYGCKPPIIHRDVKTRNILLDKNLRAKISDFGLSRIFSDDGDTHVSTAIAGTPGYLDPEYSISSRLTEKSDVYSFGVVLLEMVTDSMRSALVWIFTLNVCLQILFIPGGDSKPHPRFREKITEDYNPGFISIDCGASNDYVDEETSIFYKTDTDFIETGENLLASSQFIDINIPGFGRQLRTLRSFPEGNRNCYTLKPEYKQGEQQSYLIRAMFGYGNYDGKNHPPTFDLYLGVNYWINVNPAKYSYLWTEIIHAPTTDTIQVCLVNIDTGTPFISSLELRPLSTSIYQIMSQSYLHLRGRFDVGGPVETYYKRYKDDIYDRMWYSPDVKDWYKINTTIDVNKSGNDIYKVPAEVLKTAVQSFNRSYDLYYDYEIEWNVSLNKDSRYCVYFHFAEIQKLAPGLRRIINITLNDENILSEPIILEYMKPVTISNKNATQGFVRFSIRATAESDAPPILNAFEVYALITDLNSPTDIKDVDAMENIKRYYGISRIDWQGDPCVPEIFRWSGLDCSYGINPRIISLNLSSSKLGGEIAASVSDLSELQSLDVSDNSLNGFVPESLSQLEYLRILNIGGNKLSGSIPAKLIERSKNGSLILSVDGNQNLCTSTQCHKRNRVVIPLVVTLVGAFILSAVSLFVFRRVQ 1318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01825 1318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 683 695 IPR008271 GO:0004672|GO:0006468
Gma08g01825 1318 Gene3D - 975 1140 - -
Gma08g01825 1318 ProSitePatterns Protein kinases ATP-binding region signature. 571 592 IPR017441 GO:0005524
Gma08g01825 1318 SMART LRR_typ_2 453 477 IPR003591 -
Gma08g01825 1318 SMART LRR_typ_2 429 452 IPR003591 -
Gma08g01825 1318 SMART LRR_typ_2 1216 1239 IPR003591 -
Gma08g01825 1318 SUPERFAMILY RNI-like 400 1283 - -
Gma08g01825 1318 SMART serkin_6 565 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01825 1318 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 800 1315 - -
Gma08g01825 1318 PANTHER RECEPTOR PROTEIN KINASE, PUTATIVE-RELATED 15 769 - -
Gma08g01825 1318 Pfam Leucine rich repeat 1197 1253 IPR001611 GO:0005515
Gma08g01825 1318 Pfam Leucine rich repeat 406 466 IPR001611 GO:0005515
Gma08g01825 1318 Pfam Protein tyrosine and serine/threonine kinase 567 761 IPR001245 GO:0004672|GO:0006468
Gma08g01825 1318 PANTHER OS07G0107800 PROTEIN-RELATED 15 769 - -
Gma08g01825 1318 PANTHER OS07G0107800 PROTEIN-RELATED 800 1315 - -
Gma08g01825 1318 Gene3D Ribonuclease Inhibitor 1157 1279 IPR032675 -
Gma08g01825 1318 Gene3D Ribonuclease Inhibitor 367 491 IPR032675 -
Gma08g01825 1318 Gene3D Transferase(Phosphotransferase) domain 1 639 773 - -
Gma08g01825 1318 Pfam Malectin-like domain 32 354 IPR024788 -
Gma08g01825 1318 Pfam Malectin-like domain 807 1139 IPR024788 -
Gma08g01825 1318 Gene3D Phosphorylase Kinase; domain 1 547 638 - -
Gma08g01825 1318 ProSiteProfiles Protein kinase domain profile. 565 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01825 1318 SUPERFAMILY Protein kinase-like (PK-like) 549 761 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01825 Gma-Chr8 16290380 16366963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01825 18 759 Receptor kinase-like Gene Family AT2G19210 49.406 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gma08g01825 Malectin_like 1.1e-87 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01825 - - gmx:100779474 1243.8