Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01819 ATGATGGAGCTTTTGGAAAATGGGACAGCAAAACAAAATGAAGTTTCTGTAACCAAGAAGGATTATATCTCCACCTTGACTGAACATATCATTCATGAAATTCTCAGTCGACTCACCATGCCAGATGTTGCTCGAATTAGTTGTCTATCAAAGACATGGAAAAACTTCTCTGTCTCCTTTCCTTGCCTGAATATCGAGCAGCAATACTTTGATCATCTCTCTTACGATAGCTTCAAGAATTTTATGTACCACAAAGTTAGAAGCATGAGCATCAAAGAAGAAAGTTTGGTTATACACAAATTCAAGCTATGCATGCATTATAAATATGTAAGAGAAGCTAAAGAAGAGATTGTAAACTGCACAAGGCTAATATCTAAGATGAGCACCATCAAAGAGTTCGATTTCCAAATCATTCAAGGTAATCATTTTGATAATCCAGATTATTCTTATGAACTTCTTCATCATATCTATAACGCAAAGATGTTAATGGTGTTGAGGTTAAGTGGTTTGATAATGATACAGCCATTTAGGGATACAAAGTTTTCCCACCTTGAAATTCTAAGGTTAGAAAATGTAACTGTACACAAAGAAAGTGACATTGATTGGTTCTTTACCAGCTGCCCTATGGTAAGGGAAATAGCAATTGTTAAATGTAATGGTTTGGAGCATTTGAAGGTGTGTGGTAATCTTGGTAACCTCAAACTGCTAGAGATTGCTTTTTGTGAAATGCTTAAGAGTGTCGAAATCCAAGTGCCAAGTCTAGAAAAGCTTGTCTTGTATGAGATTAAGAGAAACAGAGGAGATGATTTTTGTATGGCTTTAAGCATAGACTCAGAAACCAGTGAAAGCTTAAGAGAGTTGACATTATGCAATTCTACCATACGAGGCATAACCTTCACTTGTTTGTTCTCTAGATGCTCAAACGTTGAGTCTTTGGTACTTGACTGGTGCATGCATTTTTTTAAGATAAAAATTGCAAGTAACAAGTTGAGGAAACTTGTCGTGAAAAAGTGTTTGGACCTTCTAGTGACAGACATTGAAGCTCCCAATTTGAGTTCATTCCTCTTTTGTCATTATCTACCCTATGGATATTATAATTCCAATAATAATGGTCAAATGATGCAATACTCTGAGGAAATCAGCCAGCTCCAAGAATGCATGCTTGACATTAACCAAGTGCTTTGGACCAAAAATATATGGATATCTCTTTGGTTTGATAAATTCAAGGACTCTGCAGACCAAAAGTTAGTCATCTACCCAAAGCACAAAAATTTCTATCATGCTGTTGTATTGGAAGACTGGAGTTCAATGGCAGAACTTGCACTAATGACTCAGATAAGTGAAGAAGCAGAAAGAATAATCATTACAACTATGAGTTTTGCTCATCTAGTTGATTACATGTTTGGGGATAGTGGTAAGGATTTGTCTAGTGTTTTGGCATTCTCGCTCACTGATGAAAGCAGTTTATATGAGCTCCTAAACAACAAGCCAAAAGTTTCATGTAAGCCTTGTTTTAATGTGGCCATAAGCCTCCAGGAAATGGAGACATTCTTGCCCAGTAGATGTTGCTCTTCCTTCTCAAGAATTGCTGCAACTTTAAAAGCAACATTGTTATCTGTTTCTCCGAATCTTCGAAGGATCTGGGACAAGAATGGGGAAGTAGTGCAACAAACATTTGTTTGTTCAAGGGCTGGTCTAAGACAAGACAGAGGTTTAACTACTGAAACTAGGAAGCATGAATCTAGAAATGAAGCAAGGTGTGAGTGTGGTGCAATGTGTCATGTTCACATTGACAATGCAAACCAGGATGGGGGATATCACAAGGTTGGTTATTTGAAAAAAGATGTCCATAATCAACTTGCTAGGCAAAGAAGGGAGCATGCATCTGATGTTAGCGGTGCCTTGAAATATTTGGCATATTTGATGTCTAAGGACCCATTGATGTTTGTGAGTTACACGGTTAATGATGACAATACAATAGGTTGCAACATTTGTTTTGGCAACCACCACATCCAGCTGACGATTGTAACAACCACTGGTTAA 2043 0.374 MMELLENGTAKQNEVSVTKKDYISTLTEHIIHEILSRLTMPDVARISCLSKTWKNFSVSFPCLNIEQQYFDHLSYDSFKNFMYHKVRSMSIKEESLVIHKFKLCMHYKYVREAKEEIVNCTRLISKMSTIKEFDFQIIQGNHFDNPDYSYELLHHIYNAKMLMVLRLSGLIMIQPFRDTKFSHLEILRLENVTVHKESDIDWFFTSCPMVREIAIVKCNGLEHLKVCGNLGNLKLLEIAFCEMLKSVEIQVPSLEKLVLYEIKRNRGDDFCMALSIDSETSESLRELTLCNSTIRGITFTCLFSRCSNVESLVLDWCMHFFKIKIASNKLRKLVVKKCLDLLVTDIEAPNLSSFLFCHYLPYGYYNSNNNGQMMQYSEEISQLQECMLDINQVLWTKNIWISLWFDKFKDSADQKLVIYPKHKNFYHAVVLEDWSSMAELALMTQISEEAERIIITTMSFAHLVDYMFGDSGKDLSSVLAFSLTDESSLYELLNNKPKVSCKPCFNVAISLQEMETFLPSRCCSSFSRIAATLKATLLSVSPNLRRIWDKNGEVVQQTFVCSRAGLRQDRGLTTETRKHESRNEARCECGAMCHVHIDNANQDGGYHKVGYLKKDVHNQLARQRREHASDVSGALKYLAYLMSKDPLMFVSYTVNDDNTIGCNICFGNHHIQLTIVTTTG 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01819 680 PANTHER OS11G0201299 PROTEIN 10 261 - -
Gma08g01819 680 Pfam F-box domain 24 56 IPR001810 GO:0005515
Gma08g01819 680 PANTHER OS11G0201299 PROTEIN 280 468 - -
Gma08g01819 680 SUPERFAMILY L domain-like 119 391 - -
Gma08g01819 680 Pfam FAR1 DNA-binding domain 546 603 IPR004330 -
Gma08g01819 680 PANTHER OS11G0201299 PROTEIN 10 261 - -
Gma08g01819 680 SMART fbox_2 26 66 IPR001810 GO:0005515
Gma08g01819 680 PANTHER OS11G0201299 PROTEIN 280 468 - -
Gma08g01819 680 SUPERFAMILY F-box domain 19 83 IPR036047 GO:0005515
Gma08g01819 680 Gene3D Ribonuclease Inhibitor 118 385 IPR032675 -
Gma08g01819 680 Gene3D - 9 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01819 Gma-Chr8 16200064 16203502 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gma08g01819 FAR1 7.3e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01819 - - gsj:114421437 1095.49