Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01814 ATGGCCACCGTTCCAGGGCAGCTCGTGTGGGAGATCGTCAAGAAAAACAATTCCTTCTTGGTCAAGCAGTTTGGAAGGGGCACCCAGAGCGTCGAATTCAGCAGAGAGAGCAACAATCTCTACAACCTCAATTCGTTCAAGTACTCTGGTTTGGCAAACAAGAAAACTGTTACTGTTCAGCCTGAGGGCAAAGATCAGGCTGTGTTGTTGGCTACAACCAAGACAAAGAAGCAAAACAAGCCCGCTGCATTGCTCCACAAATCTGTGATGAAGAAGGAGTTCAGGAGGATGGCAAAAGCTGTTGAAAACCAGGTGGCCAAAAATTACTACAGGCCTGATCTCAAGAAGGCTGCCCTTGCAAGGTTGAGTGCTGTTCACAGAAGCCTCAAAGTTGCCAAGTCTGGTGTCAAGAAGAGGAATAGACAGGGCGTGAGAGTCGCTGGTAGGAAGTGA 453 0.4857 MATVPGQLVWEIVKKNNSFLVKQFGRGTQSVEFSRESNNLYNLNSFKYSGLANKKTVTVQPEGKDQAVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAVENQVAKNYYRPDLKKAALARLSAVHRSLKVAKSGVKKRNRQGVRVAGRK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01814 150 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 1 150 - -
Gma08g01814 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
Gma08g01814 150 Gene3D - 6 133 - -
Gma08g01814 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01814 Gma-Chr8 16180449 16182603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01814 1 142 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 72.535 5.70e-75 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01814 K02903 - gmx:100306153 290.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00120 07 1023810 1025525 Gma08g01814 08 16180449 16182603 ECH
Gma08g01814 08 16180449 16182603 Gma08g01814 08 16180449 16182603 ECH
Gma07g00120 07 1023810 1025525 Gma08g01814 08 16180449 16182603 GST
Gma13g03154 13 45672244 45675815 Gma08g01814 08 16180449 16182603 PCT
Gma15g00213 15 1829543 1831968 Gma08g01814 08 16180449 16182603 PCT
Gma08g01814 08 16180449 16182603 Gma13g03154 13 45672244 45675815 PCT
Gma08g01814 08 16180449 16182603 Gma15g00213 15 1829543 1831968 PCT