Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01798 ATGCAACTTTTAAGAATTGGGATAGTGCTTCTATATATACAGAACATGTTTTCTTTAAGTTTTCAAACTTTGAATGTAAAGATTATTATGAACTCTCATTGTTTCTCTTTTACTGGATTTGCTGATAACTTCTCATGGATTTGCCTTGGAGAATTCAGTTTGACTTCCTTTTCCACCCAAAGGTGTATAATAGACATTATCAACATTTTTTTTATGGGTGTCTTTTATGCATCATTGCTCTCCAATCTGATCAAGAAAAGCCCTGCAAGTAGTAGCTACAGAAAGGGGTGGATTCATGTAGTTGCTTCAGTATGTTGTACTCTTTTAAGCATTGCATATTTTATTGATGGTTTGTGGAATCTCATAGCCAAAAAAACCACTGGCTTCAATCAGCTGAACTTGTTGGTTTGCATTATCAGAGGACTAGTTTGGATTTCTTTAGCAGTTTCATTGTTTGTTCAAAGATCCCAATGGATAAAAATTTCATGCTCTATTTGGTGGATGACTTCATGTACATTGGTTTCAGCATTCAATGTTGAAATTCTAGTCAAAGAGCATACATTTGAAATTTTTTATATGGCAATATGGCCAGTGCACATTCTAACTATTTTCTGTGCCTTCCAAAACCATGGCTTCTTTGTCCCACAAGAAACACCAGATGCCAGTTTATGTGAGCCTCTATTAGTTCATAAGGACATGCATAAACAAACAGAACTAGGTCATGCCTCTTTTTGCAGCCGATTCAGTTTCTCTTGGATGAATGCTTTACTCAGTTTGGGTTACTCAAAGCCACTAGCACTTGAAGACATCCCTTCTCTTGCTTCTGAAGATAAAGCTGATTTTGCCTATCAAAAGTTTGTACATGCATGGGATTCCCTTTTGAGGGAGAGGGGCAGGAACAATTCTAGAAACTTGGTTCTATGGTCCATAGCTCGAGTTTACTTGAACGAAAACATCTTCATAGCTATTTGTGCATTTCTCAGGACAATTTGTGCTGTTGTTTCTCCTTTACTTGTTTATGCTTTTGTAAACTATTCCAGTAGCATTGAGGAAGAGCTAAAACAAGGAATAGCCATAGTGGGGTGTCTTATATTTGCCAAGGTAGTTGAGTCTGTTTCTCAGAGGCATTGGTCTTTTAACTCAAGGAGGTTAGGAATGAAAATGAGATCAGCTTTAATGGCTGCAGTGTATCAAAAGCAATTAAAACTTTCAGCTTTGGGTAGGAGAAGGCATTCAACTGGTGAGATTGTGAATTACATTGCAGTTGATGCCTATCGAATGGGGGAGTTTCCATGGTGGTTTCATACTTTAATGTTTTCTGCATTGCAAGTTTTTCTGGCTCTTGGTGTCCTTTTTGGTGTTGTTGGTCTAGGTGCTCTTCCTGGTTTGGTGCCTCTTATCATTTGTGGATTTCTCAATGTACCATTTGCAAAGATCCTTCAAAAATGTAGGTCGGAATTTATGATTGCACAGGATGAGCGTCTGAGGTCAACTTCAGAGATTCTTAGTAGTATGAAAATCATAAAGCTACAATCCTGGGAGGATAACTTCAAGAAATTTGTTGAATCCCTTCGCGCTAAAGAGTTTAAATGTTTGGCTGAAGCACAGTTTATGAGAGCTTATGGAACATTTATATATTGGATGTCTCCTGCCATCATTTCCTCGGTTATTTTTGTGGGATGCGCGCTTTTCCAGAGTTCCCCGTTGAATGCTGCAACTATCTTCTCAGTTCTTGCAGCATTGAGAAGCATGGGAGAACCTGTCACATTGATTCCAGAAGCACTTTCTGTTCTGATCCAAGTTAAGGTCTCCTTTGATCGTATCAACACTTTTTTGCTTGATGATGAGATAAAAAGTGATGATATTAGAAGAACTTCAAAACAAGATTCTTGCAGCAAGAGTGTTGAAATTCTAGCAGGCAACTTCAGTTGGGATCAGCAGCAATCAGTGCCTCCAACTTTGAGGAAAGTGAATTTTGAGATCAAGTGGGGGCAGACAGTAGCAGTTTGTGGCCCAGTTGGAGCTGGAAAAACATCTCTCCTGTATGCAATACTTGGAGAGATACCCAAAATTTCAGGAATTGTTAGTGTATGTGGAACACTTGCCTACGTTTCCCAAACTCCTTGGATCCAAAGTGGTACAATTCGTGATAATATTCTCTATGGAAAACCAATGGATGAAACCAGGTATGGATATACCATTAAGGTCTGTGCCTTGGATAAGGATATTGATGGATTTAGACATGGTGATCTTACGGAAATAGGTCAGAGAGGGATCAACATGAGTGGAGGACAAAAGCAAAGGATTCAACTAGCTCGTGCAGTCTATAATGATGCTGATATCTATCTCCTAGATGACCCTTTTAGTGCTGTAGATGCTCATACTGCTTCTATTCTGTTTAATGATTGTGTCAGGGTTGCTTTAAGAAGGAAAACAGTTATTCTTGTGACTCATCAAGTTGAATTTCTCTCAAAAGTTGATAAAATCTTGGTAATGGAAAGAGGAAAAATTACTCAATTGGGTAATTATGAAGATCTGTTGACTGCTGGAACAGCATTTGAACAACTTTTGAGTGCTCATAGAGAGGCAATTACAGGGATAGAAAAAAGTAGTGCATACAAAAGAGAAGTTGAAAATTTGGTTGCAGTTCAGCTTGAGGACTCTCATGTTTGTAATCTCACTAAAGGTGGAAGTGATGGGGACATTTCTACCAAGATTCAACTTACACAAGAAGAAGAAAAGGAGAGTGGTGATGTTGGGTGGAAGCCATTCTGTGACTATATTTTCTTCCCCAAGGGATCTTTGCTTCTATGTTTGAGCATATTAGCACAATTTGCTTTTGTAGGTTTTCAGGCTGCATCAACTTATTGGCTTGCTCTAGCCATTGAAATGCAAAAAGTAACTAGCAGCATCTTAATTGGAGTTTATAGTGTGATTTCTTTTTTAAGCATTGTCTTTGTATATCTGAGGTCTTATTTTGCTGCACATCTTGGTTTAAAAGCTTCTAAAGCTTTTTTCTCTGCCTTCACTGATGCTATCTTTAATGCTCCTATGTTGTTCTTTGATTCAACCCCTATAGGAAGGATTTTGACCCGAGCTTCATCAGATTTGAGTATTTTAGATTTTGATATCCCTTTTACCACCATCTTTGTAACATCTGAAATAGCTGAACTTCTGACAATGATTGGGATAATGGTTTCGGTCACATGGCAAGTGCTCATTGTTGCAGTTCTTGCCATGGTGGCCTCAAAATATGTTCAGGGCTATTATCAAGCTTCTGCTAGAGAAATTATACGGATCAATGGAACTACTAAAGCTCCTCTTATGAATTTTACAGCTGAGACATCACTTGGTGCAGTTACTATCAGAGCTTTCAACATGACTGACAGATTTTTCAAAAACTACCTTAATCTTGTTGACACAGATGCCACAATGTTCTTTCATTCCAATGCTGCTATCGAATGGTTAATTCTGAGGATTGAATTACTTCAAAATTTGACACTCTTCACTGCAGCTTTGCTGCTTGTTCTACTTCCAAAGGGATATGTGGCCCCTGGCCTTGTTGGACTTTCTCTGTCTTATGCTTTTTCATTGACAGCAACCGTAGTTTATCTGACTCGAATGTTTTGTAACTTATCAAACTATGTAATCTCTGTTGAAAGAATCAAGCAATTCATTCACATACCGGCAGAGCCTAGTGCAATTGTAGAGGATAATAGACCACCACCTTCTTGGCCTTCCAAGGGTAGAATAGATCTCCAATCTCTAGAGATTAGATATCGGCCAAATGCTCCATTAGTTCTTAAGGGCATCTCTTGTAGGTTTGAAGAAGGGAGTAGAGTGGGAGTTGTGGGAAGGACTGGAAGTGGAAAAACTACACTTATAAGTGCTTTGTTTCGCTTAGTTGAGCCTACCAGAGGTGACATTCTTATTGATGGTATTAATATCTGCTCAATAGGGCTAAAAGATTTGAGAACAAAGCTAAGCATCATTCCTCAAGAACCAACTCTTTTCAAGGGCAGCATTCGAAAGAACTTGGACCCTCTATGCCTGTACTCTGATGATGAAATATGGAAGGCTTTAGAGAAATGTCAGCTTAAGGCAACAATTAGTAGTCTTCCAAATCTCTTGGACACTTCTGTGAGTGATGAAGGTGAAAACTGGAGTGTGGGACAGCGTCAACTCATATGTCTCGGAAGAGTGCTTCTTAAGAGGAACAGAATTCTTGTTCTGGATGAAGCTACTGCTTCCATTGATTCTGCCACAGATGTTATTCTTCAACAAGTCATCAGACAAGAATTTTCAGAATGCACAGTTATAACGGTGGCTCACAGAGTTCCAACTGTAATAGACAGTGACATGGTCATGGTCCTATCCTATGGGAAAGTGGTGGAGTATGACAAGCCTTCAAAGCTCATGGGTACGAACTCTTCATTCTCCATGCTGGTAGCTGAATATTGGTCCAACTGCAATAGGAATTCGCTCCCAAAAGATTAG 4497 0.39 MQLLRIGIVLLYIQNMFSLSFQTLNVKIIMNSHCFSFTGFADNFSWICLGEFSLTSFSTQRCIIDIINIFFMGVFYASLLSNLIKKSPASSSYRKGWIHVVASVCCTLLSIAYFIDGLWNLIAKKTTGFNQLNLLVCIIRGLVWISLAVSLFVQRSQWIKISCSIWWMTSCTLVSAFNVEILVKEHTFEIFYMAIWPVHILTIFCAFQNHGFFVPQETPDASLCEPLLVHKDMHKQTELGHASFCSRFSFSWMNALLSLGYSKPLALEDIPSLASEDKADFAYQKFVHAWDSLLRERGRNNSRNLVLWSIARVYLNENIFIAICAFLRTICAVVSPLLVYAFVNYSSSIEEELKQGIAIVGCLIFAKVVESVSQRHWSFNSRRLGMKMRSALMAAVYQKQLKLSALGRRRHSTGEIVNYIAVDAYRMGEFPWWFHTLMFSALQVFLALGVLFGVVGLGALPGLVPLIICGFLNVPFAKILQKCRSEFMIAQDERLRSTSEILSSMKIIKLQSWEDNFKKFVESLRAKEFKCLAEAQFMRAYGTFIYWMSPAIISSVIFVGCALFQSSPLNAATIFSVLAALRSMGEPVTLIPEALSVLIQVKVSFDRINTFLLDDEIKSDDIRRTSKQDSCSKSVEILAGNFSWDQQQSVPPTLRKVNFEIKWGQTVAVCGPVGAGKTSLLYAILGEIPKISGIVSVCGTLAYVSQTPWIQSGTIRDNILYGKPMDETRYGYTIKVCALDKDIDGFRHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTASILFNDCVRVALRRKTVILVTHQVEFLSKVDKILVMERGKITQLGNYEDLLTAGTAFEQLLSAHREAITGIEKSSAYKREVENLVAVQLEDSHVCNLTKGGSDGDISTKIQLTQEEEKESGDVGWKPFCDYIFFPKGSLLLCLSILAQFAFVGFQAASTYWLALAIEMQKVTSSILIGVYSVISFLSIVFVYLRSYFAAHLGLKASKAFFSAFTDAIFNAPMLFFDSTPIGRILTRASSDLSILDFDIPFTTIFVTSEIAELLTMIGIMVSVTWQVLIVAVLAMVASKYVQGYYQASAREIIRINGTTKAPLMNFTAETSLGAVTIRAFNMTDRFFKNYLNLVDTDATMFFHSNAAIEWLILRIELLQNLTLFTAALLLVLLPKGYVAPGLVGLSLSYAFSLTATVVYLTRMFCNLSNYVISVERIKQFIHIPAEPSAIVEDNRPPPSWPSKGRIDLQSLEIRYRPNAPLVLKGISCRFEEGSRVGVVGRTGSGKTTLISALFRLVEPTRGDILIDGINICSIGLKDLRTKLSIIPQEPTLFKGSIRKNLDPLCLYSDDEIWKALEKCQLKATISSLPNLLDTSVSDEGENWSVGQRQLICLGRVLLKRNRILVLDEATASIDSATDVILQQVIRQEFSECTVITVAHRVPTVIDSDMVMVLSYGKVVEYDKPSKLMGTNSSFSMLVAEYWSNCNRNSLPKD 1498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01798 1498 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 617 859 IPR003439 GO:0005524
Gma08g01798 1498 Gene3D - 645 886 IPR027417 -
Gma08g01798 1498 CDD ABCC_MRP_domain1 635 836 - -
Gma08g01798 1498 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 319 600 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma08g01798 1498 CDD ABCC_MRP_domain2 1249 1469 - -
Gma08g01798 1498 Gene3D ABC transporter type 1, transmembrane domain 902 1232 IPR036640 GO:0005524|GO:0016021
Gma08g01798 1498 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 95 1496 - -
Gma08g01798 1498 SMART AAA_5 663 836 IPR003593 -
Gma08g01798 1498 SMART AAA_5 1277 1470 IPR003593 -
Gma08g01798 1498 ProSitePatterns ABC transporters family signature. 761 775 IPR017871 GO:0005524
Gma08g01798 1498 CDD ABC_6TM_ABCC_D2 933 1226 IPR044726 GO:0140359
Gma08g01798 1498 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 95 1496 - -
Gma08g01798 1498 Pfam ABC transporter transmembrane region 319 580 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma08g01798 1498 Pfam ABC transporter transmembrane region 936 1195 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma08g01798 1498 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 939 1214 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma08g01798 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1240 1483 IPR027417 -
Gma08g01798 1498 Gene3D - 1234 1484 IPR027417 -
Gma08g01798 1498 SUPERFAMILY ABC transporter transmembrane region 935 1231 IPR036640 GO:0005524|GO:0016021
Gma08g01798 1498 SUPERFAMILY ABC transporter transmembrane region 303 614 IPR036640 GO:0005524|GO:0016021
Gma08g01798 1498 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1253 1485 IPR003439 GO:0005524
Gma08g01798 1498 CDD ABC_6TM_ABCC_D1 320 608 IPR044746 GO:0140359
Gma08g01798 1498 Gene3D ABC transporter type 1, transmembrane domain 306 620 IPR036640 GO:0005524|GO:0016021
Gma08g01798 1498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 635 858 IPR027417 -
Gma08g01798 1498 Pfam ABC transporter 654 788 IPR003439 GO:0005524
Gma08g01798 1498 Pfam ABC transporter 1268 1416 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01798 Gma-Chr8 16014310 16020601 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01798 629 882 Calmodulin-binding Proteins AT2G36910 28.467 3.41e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01798 - - gmx:100813711 2876.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01798 08 16014310 16020601 Gma08g01798 08 16014310 16020601 ECH