Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01795 ATGAGTCAAGAGCAACAGAAGCGGGGGAAGCAAGAGAAAGGTTCTGATGGTGTTGAGAAGGTTATTGTTGCCGTTAAGGCATCAAAGGAAATTCCAAAGACTGCTCTTGTTTGGTCTCTCAGTCATGTTGTTCAACCTGGGGATTGCATTACACTACTAGTGGTTGTGCCTTCACAAAGTTCAGGCAGAAGATTATGGGGTTTTCCGAGATTTGCTGGTGATTGTGCCAGTGGTATTAAGAAGTACCCTCCAGGAACAATATCAGAGCAGAAGAGTGACATCACTGATTCTTGCTCTCAGATGATCCTACAGCTTCATAATGTCTATGATCCAAACAAGATAAATGTCAGGATTAAAATTGTATCCGGATCACCTTGTGGAGCAGTGGCTGCCGAAGCCAAGAAAGCACAAGCCAATTGGGTTGTATTAGACAAACAGCTTAAACATGAGGAAAAGCGATGCATGGAAGAACTGCAGTGTAACATTGTAGTTATGAAGCGTTCTCAGCCTAAAGTACTGCGCTTGAATTTGATTGGACCACAGAAGAAGGAAGTTGAAGAAGCAGGTCCATCACCTTCTGAGCAAGATGACATGCCTGAAAACCGAACCAAAATAAAGCTGGATTCCTTAAATTCTATCAAAGGACCAGCTGTAACTCCAACTAGCAGCCCTGAGCTAGGGACACCATTCACTGCAACTGAAGCTGGTACTTCATCAGTTTCAAGCTCTGATCCAGGAACTTCACCATTCTTCATATCAGAGATGAATGGTGAGTTCAAAAAAGAGGAAACTATCAAGGAAAGTCAAGAACTTGTTGATACTAATTCAGACACAGAAAGTGAAAGTCTATCCACATCTTCAGCAAGCATGAGATACCAGCCATGGATAACAGAATTGCTTTTACATCAACCATCAACACAATGCAATGAAGAGAGATCAGAGATGTCTCACGGTATGCCTCAAGCATCAACAACCAGAGCTTTCCTAGAAAAGTATTCTAGGCTTGATAGAGGAGCTGGATTTGAAATCTCAACCTATAGAAATGACATGGATTTCAGTGGGAATTTAAGAGAAGCAATAGCATTATCTGGAAACGCCCCACCTGGTCCCCCTCCATTATGTTCAATATGTCAACACAAGGCACCTGTTTTTGGAAAACCTCCAAGGTGGTTCAGCTATGCTGAGTTGGAACTTGCTACTGGCGGATTTTCACAGGCCAACTTCTTGGCAGAAGGAGGGTTTGGATCTGTTCACCGAGGGGTTCTACCAGAAGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAAGGTGATCTTGAATTTTGCTCAGAGGTGGAAGTCTTGAGCTGTGCTCAGCACCGCAATGTTGTTATGCTCATTGGGTTCTGTATAGAGGATAAAAGAAGGCTACTGGTTTATGAGTATATATGCAATGGATCATTGGATTCACATTTATATGGGCGACAACGGGATCCATTAGAATGGTCTGCACGGCAAAAAATTGCTGTTGGAGCTGCTCGTGGTTTACGATATCTTCATGAAGAGTGCAGAGTAGGTTGTATTATCCACCGTGACATGAGGCCTAACAATATTCTCATAACTCATGATTTTGAACCTCTGGTTGGCGATTTTGGTCTGGCGAGGTGGCAGCCTGATGGGGACACAGGTGTCGAaactagagtgattggaacatttgggtatttggctcctgaatatgctcaaagtggccaaatcactgaaaaagctgatgtttattCCTTTGGGGTGGTattagtggagcttgttactgggagaaaagctgtggatctcactaggccaaaggggcagcaatgccttactgagtggGCACGACCACTTTTGGAAGAAGATGCCATTGAGGAACTGATTGATCCAAGGCTTGGTAACCACTATTCAGAACACGAGGTCTATTGTATGCTGCATGCTGCATCATTATGCATACAGCGAGATCCTCAATGTAGACCACGCATGTCACAGGTTCTCCGAATACTAGAAGGTGACATGGTGATGGACTCAAATTACATCTCAACTCCAGGTTATGATGCAGGAAACCGGAGTGGTAGACTTTGGTCAGAGCCGTTACAAAGGCAGCACCATTATAGTGGTCCCCTTTTAGAAGAGTCTCTGGAGTCCTTCAGTGGAAAGCTATCCCTTGACAAGTACAAGCCTTCCTATTGGGGAGATAGGGACAAGGCTAGAAGGGCTTCATGTGTAGATGACATCTGA 2253 0.4092 MSQEQQKRGKQEKGSDGVEKVIVAVKASKEIPKTALVWSLSHVVQPGDCITLLVVVPSQSSGRRLWGFPRFAGDCASGIKKYPPGTISEQKSDITDSCSQMILQLHNVYDPNKINVRIKIVSGSPCGAVAAEAKKAQANWVVLDKQLKHEEKRCMEELQCNIVVMKRSQPKVLRLNLIGPQKKEVEEAGPSPSEQDDMPENRTKIKLDSLNSIKGPAVTPTSSPELGTPFTATEAGTSSVSSSDPGTSPFFISEMNGEFKKEETIKESQELVDTNSDTESESLSTSSASMRYQPWITELLLHQPSTQCNEERSEMSHGMPQASTTRAFLEKYSRLDRGAGFEISTYRNDMDFSGNLREAIALSGNAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPEGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRDPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWARPLLEEDAIEELIDPRLGNHYSEHEVYCMLHAASLCIQRDPQCRPRMSQVLRILEGDMVMDSNYISTPGYDAGNRSGRLWSEPLQRQHHYSGPLLEESLESFSGKLSLDKYKPSYWGDRDKARRASCVDDI 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01795 750 SUPERFAMILY Protein kinase-like (PK-like) 387 680 IPR011009 -
Gma08g01795 750 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 708 - -
Gma08g01795 750 PANTHER OS01G0253100 PROTEIN 16 708 IPR045271 GO:0004714|GO:0006468
Gma08g01795 750 ProSitePatterns Tyrosine protein kinases specific active-site signature. 524 536 IPR008266 GO:0004672|GO:0006468
Gma08g01795 750 MobiDBLite consensus disorder prediction 208 248 - -
Gma08g01795 750 CDD USP_Like 20 143 - -
Gma08g01795 750 ProSiteProfiles Protein kinase domain profile. 403 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01795 750 Gene3D Phosphorylase Kinase; domain 1 375 478 - -
Gma08g01795 750 Gene3D Transferase(Phosphotransferase) domain 1 479 684 - -
Gma08g01795 750 MobiDBLite consensus disorder prediction 214 248 - -
Gma08g01795 750 MobiDBLite consensus disorder prediction 182 201 - -
Gma08g01795 750 CDD STKc_IRAK 409 675 - -
Gma08g01795 750 Pfam Protein tyrosine and serine/threonine kinase 407 672 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01795 Gma-Chr8 15977309 15982709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01795 383 692 Trihelix Transcription Factor Family AT1G70460 51.562 1.61e-101 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Gma08g01795 PK_Tyr_Ser-Thr 6.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01795 - - gmx:100783226 1488.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01795 08 15977309 15982709 Gma08g01795 08 15977309 15982709 ECH
Gma07g00105 07 875174 879608 Gma08g01795 08 15977309 15982709 GST
Gma13g03151 13 45618792 45623014 Gma08g01795 08 15977309 15982709 PCT
Gma15g00215 15 1895345 1899254 Gma08g01795 08 15977309 15982709 PCT
Gma08g01795 08 15977309 15982709 Gma13g03151 13 45618792 45623014 PCT
Gma08g01795 08 15977309 15982709 Gma15g00215 15 1895345 1899254 PCT