Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01794 ATGGCTTCGAGCTCTGCGGCGGAAGGAGTATCAATGGACGATGATTACGAAACCTTGATTGCAACCACCGACGTGGAGCTTCTGAAGAGAGCGTGGCGCAACGAGAAGGCGGCCCCAGAGATTCTCCGCTACGAATCTAAATTGGTTTCCCGCGTCAACAAAGTCATTCAACTCATGGAAGAAATTGTGGAGGAAAAATCCAGTGGCGGTACTGATCCTCTTTCGGTGTCTCTATATCAGATGGACTTGGATAGAACTCTCTTTTTGTTAAGATCCTATCTCAGGATTCGCATCCAGAAGATTGAAAAGTACGTGTTCCACATCCAAAAAACTGAAGAACTTAGGAACAGGCTATCTAAATACGAGAAAGATTTTGCCAAAATGTGTGAAAATGACCTAGAGCAACATCTGGATGAGAGTGTTCTGTCGAAGTTGCCTAAAGATTATAAGTCTGTTCTGAGGCAATCTTCAATGAGTGAAGAGGATGACATGGTCCCAGAACCACAACTAGACACATTTGTTTTGTGTAGAAGTAAAGAGTATCTCACGGGCATTCAACTCGAAGATGGACCTGTTGATGACAGGTCGAAGCTGTTTGAGATGGAGCCAGGTGTCCTCCACTTCATATGTTACAAATCAATAAAGGCACTTGTAGAGAGTGGCAAAATTGATCTCCTCTGA 681 0.4391 MASSSAAEGVSMDDDYETLIATTDVELLKRAWRNEKAAPEILRYESKLVSRVNKVIQLMEEIVEEKSSGGTDPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKYVFHIQKTEELRNRLSKYEKDFAKMCENDLEQHLDESVLSKLPKDYKSVLRQSSMSEEDDMVPEPQLDTFVLCRSKEYLTGIQLEDGPVDDRSKLFEMEPGVLHFICYKSIKALVESGKIDLL 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01794 226 SUPERFAMILY GINS helical bundle-like 21 153 IPR036224 -
Gma08g01794 226 Pfam GINS complex protein 67 123 IPR021151 -
Gma08g01794 226 SUPERFAMILY PriA/YqbF domain 170 226 - -
Gma08g01794 226 Pfam DNA replication complex GINS protein SLD5 C-terminus 168 226 IPR031633 -
Gma08g01794 226 PIRSF GINS_Sld5 1 226 IPR008591 GO:0006261
Gma08g01794 226 Coils Coil 111 131 - -
Gma08g01794 226 Gene3D - 11 216 - -
Gma08g01794 226 CDD GINS_A_Sld5 24 142 IPR038749 -
Gma08g01794 226 PANTHER SLD5 PROTEIN 6 226 IPR008591 GO:0006261
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01794 Gma-Chr8 15972056 15975585 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01794 1 173 Core DNA Replication Machinery Family AT5G49010 58.960 2.92e-64 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01794 K10735 - gmx:100784291 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00104 07 868028 870838 Gma08g01794 08 15972056 15975585 GST