Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01789 ATGGACAACATTTGGATTGTGTTTGTGACAGTGTTTCTCTTATGCACTGTGATCCTCTACAGGAACAGGCTTAGCCTTATGCTTAAATCAAAACGTAAGAAGAATAAGCTTCCATTAGGCACTCTTGGATGGCCTTTTATCGGTGAAACCATTGAGTTTGTTTCTTGTGCCTACTCTGATCGCCCTGAGAGCTTCATGGACAAGCGACGCCGCATGTATGGCAAGGTGTTCAAGTCACACATATTTGGAAGCCCTACAATTGTTTCAACTGATGCTAGTGTGAATAAGTTTATACTTCAAAGTGATGCAAAAGTTTTTGTTCCTTCTTATCCCAAGTCTCTTACTGAGTTGATGGGAGAGTCTTCTATTTTGCTCATCAATGGAAGCCTTCAGAGGAGAATACATGGACTCATTGGAGCTTTCTTCAAGTCTCAACAGCTAAAGGCTCAGATCACCAGAGATATGCAAAAGTATGTCAAAGAATCCATGGCAAGTTGGAGAGAGGACTGCCCCATATACATACAAGATGAAACAAAAAAGATTGCTTTTCATGTACTAGTCAAGGCATTGATTAGTTTGGATCCAGGAGAAGAAATGGAACTTCTAAAGAAACATTTTCAGGAATTTATCTCAGGCCTCATGTCTCTACCAATAAAACTACCAGGAACTAAACTCTATCAATCTTTGCAGGCAAAAAAGAAAATGGTGAAATTAGTGAAGAGAATTATCCTAGCTAAGAGAAGTAGTGGCTTCTGCAAAGTTCCAAAAGATGTGGTGGATGTCCTTCTTAGTGATGCTAATGAAAAATTAACGGATGATTTAATAGCAGATAATATTATTGATATGATGATTCCAGGGGAGGACTCAGTGCCACTTCTTATGACTCTGGCTACAAAATATCTATCGGAATGTCCTGCTGCTTTGCAACAATTGACGGAGGAAAATATGAAGCTTAAGAAAATTCAAGATCAGGTTGGAGAATCCCTGAGTTGGAGCGATTACTTATCACTGCCATTTACTCAAACAGTCATCACTGAAACTTTGAGGATGGGAAATATTATAATTGGAGTCATGAGAAAGGCCTTAAAAGATGTTGAAATAAAAGGGCACTTAATACCAAAAGGGTGGTGTGTGTTTGTAAATTTTAGATCAGTTCATCTAGATGACAAAAACTATGAATGTCCATATCAATTCAATCCTTGGAGGTGGCAAGACAAAGATACGAGCAGTTGCAATTTCACTCCTTTTGGAGGGGGACAAAGGCTGTGCCCTGGCCTTGACTTGGCCAGGCTGGAAGCTTCCATCTTCCTACACCACTTTGTCACTCAATTCAGATGGCATGCTGAAAAAGATGCAATAGTGAACTTCCCTACAGTAAGAATGAAAAAGAGGATGCCTGTGAAGGTAAGGAGAGTGGAATCTTAA 1425 0.3965 MDNIWIVFVTVFLLCTVILYRNRLSLMLKSKRKKNKLPLGTLGWPFIGETIEFVSCAYSDRPESFMDKRRRMYGKVFKSHIFGSPTIVSTDASVNKFILQSDAKVFVPSYPKSLTELMGESSILLINGSLQRRIHGLIGAFFKSQQLKAQITRDMQKYVKESMASWREDCPIYIQDETKKIAFHVLVKALISLDPGEEMELLKKHFQEFISGLMSLPIKLPGTKLYQSLQAKKKMVKLVKRIILAKRSSGFCKVPKDVVDVLLSDANEKLTDDLIADNIIDMMIPGEDSVPLLMTLATKYLSECPAALQQLTEENMKLKKIQDQVGESLSWSDYLSLPFTQTVITETLRMGNIIIGVMRKALKDVEIKGHLIPKGWCVFVNFRSVHLDDKNYECPYQFNPWRWQDKDTSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTQFRWHAEKDAIVNFPTVRMKKRMPVKVRRVES 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01789 474 SUPERFAMILY Cytochrome P450 32 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma08g01789 474 PANTHER 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90D1 15 467 - -
Gma08g01789 474 Pfam Cytochrome P450 38 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma08g01789 474 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma08g01789 474 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma08g01789 474 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma08g01789 474 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma08g01789 474 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma08g01789 474 PANTHER CYTOCHROME P450 26 15 467 - -
Gma08g01789 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506|GO:0016705
Gma08g01789 474 Gene3D Cytochrome P450 27 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01789 Gma-Chr8 15940901 15945926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01789 36 445 Cytochrome P450 AT3G13730 68.193 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01789 K12638 - gmx:100782687 931.784
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01789 08 15940901 15945926 Gma08g01789 08 15940901 15945926 ECH
Gma07g00099 07 836852 840883 Gma08g01789 08 15940901 15945926 GST