Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01781 ATGGGACTGCAGCTGATTTTCTTGCTAATTGAGCTGCATTTAGTTTTCTGCACTCAGCAGGTCCATGAATATGCAGCCACCAAGCTGCAACATTCCAGTGACAGAAGCCATTTTAGTATTGCAATCCCACCATCAAAGTCATCTTCTGAAGGTCATTCAAGTATTGCACACCCACCTTCTGAGTCATCTTCTGGTGTACCTGCAAGTATTGCACTTTCAGCTTCCAAGTCAATTCACAAAGCTCCTACAATTATATGGACACATAGTTCTGTGGATTCTCCTATCTTACATCATAAGCATCACTTTTCCAAAAGAAAGTTCTCCAATCCAACTCCAGTGGCAGCGCCAACCTATCCAGTCCAGGCTCCTACATACAGTCATCAAGGTCCTTCAGTCTTCGAATCACAACCTCCTTTCTCCTCACCAAATATTAAGGATATTCATGCCCCTGCAACTGCACCATCACCAGCAATTCTGCCAGGTCACCTGGATGTACCCTCTCCTTCACCTAGAATTTCTCCTCTAGGTTCATCGTTGAAGAAGAAAAAGACTCCATCACCAGCATATACATTGATTCTGCCACCTCCACCTCCTAATAAGGATTGCTTATCGACAACTTGCTTGGAGCCCTTGACATATACACCTCCTGGGTCACCTTGTGGTTGTGTATGGCCGCTTCAGGTTAAACTCCATATCAACATTGCAATATACAAGTTTTTTCCGTTGGTTTCAGAGCTAGCCAAGGAAATTGCAGCAAGTGTTCTGCTGAACCATACCCAGGTTCGCATTGTGGGAGCTGATGCAGCTAATCAGCAACTGGAGAAGACCACTGTTCTCATAGACTTAGTACCCAAAGGAGTAAAATTTGATGATACCACTGCATTTTTAATATATAAGAAATTCTGGTACAGGGAGATTCTGATAGATGCTTCCGTCTTTGGTGCTTATGAAGTACTCTATGTTCATTCTCCAGGTCTTCCACCATCTCCACCTTCAACTCCCTCAGATGCTTCTGGTATAGATGATGGGCCAAATCCAGGACATGACAACAATGGAACGATAATGAAACCTTTAGGAGTAGATGTCCCAAAGAAGAAAAAAGAAGGGAATAATGGAAGAATGATTGTTATAATTGTGCTGTCATCAGTTACCGCTTCTGTTGTATTCATTGGTCTTGCTTGGCTTTGTCTGCTGAAATGCCGTACCTATGTTCATGAACATAAACCAGTTCCAGATGGTTTTATTTCATCCTCTTCAAAACAATCAAGGGCTGCTAGGTCATTGACTCAAGGGATCAGGCTAGGCTCTGGATCACAGTCCTTCAATTCTGGAACAATAACATATACAGGGTCTGCTAAGATTTTTACTTTGaatgacttggagaaagcaacaaataactttgactcttcaagaatattaggagaaggtggctttgggcttgtttacaaaggtattctaaatgatgggagggatgtagccgtgaagattctcaaaagagatgatcagcgaggtggccgtgaattcttggcagaagttgaaatgcttagccgtctacatcatagaaatttagttaaattattgggtatatgcacaGAGAAACAGACTCGCTGCTTAGTTTATGAGCTTGTCCCTAATGGAAGTGTCGAATCTCACTTACATGTAGCTGACAAGGTAACTGATCCACTGGATTGGAATTCCCGGATGAAGATTGCTCTTGGTGCAGCTCGGGGATTGGCCTATCTACATGAAGATTCAAATCCATGTGTCATACATCGAGACTTCAAGGCCAGCAACATCTTGTTGGAGTACGATTTTACACCCAAGGTCTCAGATTTTGGATTGGCTAGAACAGCACTGGATGAGAGAAACAAGCACATCTCCACACATGTTATGGGAACATTTGGCTACTTAGCTCCTGAATATGCAATGACTGGCCATCTTCTGGTCAAGAGTGATGTTTATAGTTATGGAGTTGTACTCCTTGAGCTCCTAACTGGAAGAAAGCCTGTGGATTTGTCACAACCACCGGGTCAAGAAAATCTCGTGACATGGGTTCGTCCACTTCTCACAAGTAAGGAAGGCTTGCAAATGATCATAGACCCATATGTAAAGCCTAACATTTCTGTTGATACTGTGGTAAAAGTTGCGGCAATTGCATCCATGTGTGTGCAACCAGAAGTCTCTCAACGTCCTTTCATGGGAGAAGTTGTTCAGGCCTTGAAGCTAGTATGCAGTGAGTTTGAGGAAACAGACTTTATAAAATCAAAGGGTTCTCAAGAGGGTCTTCTAACCGATGTGAAAGGAATTTTTTCCGAAGCTTCAGGTGAAAGAGTGGAATTTTCAGAGTGTCAAAAAACTTTTTCTGGCTATCAATCTAATGAAGAAAAGGTAAGATTATCAGCATCAGAGTTGCTCAGTACTTCAGGTCAGGAATTTGAGTCGTTCAGGCAGTATTCTCGTTCAGGGCCTCTAATTATTGGGAAGAAAAGGCAGTTCTGGCAGAAGTTGAGAAGTTTGTCTAGAGGTAGCTCCAGTGAACATGGATCCCATTAA 2553 0.3909 MGLQLIFLLIELHLVFCTQQVHEYAATKLQHSSDRSHFSIAIPPSKSSSEGHSSIAHPPSESSSGVPASIALSASKSIHKAPTIIWTHSSVDSPILHHKHHFSKRKFSNPTPVAAPTYPVQAPTYSHQGPSVFESQPPFSSPNIKDIHAPATAPSPAILPGHLDVPSPSPRISPLGSSLKKKKTPSPAYTLILPPPPPNKDCLSTTCLEPLTYTPPGSPCGCVWPLQVKLHINIAIYKFFPLVSELAKEIAASVLLNHTQVRIVGADAANQQLEKTTVLIDLVPKGVKFDDTTAFLIYKKFWYREILIDASVFGAYEVLYVHSPGLPPSPPSTPSDASGIDDGPNPGHDNNGTIMKPLGVDVPKKKKEGNNGRMIVIIVLSSVTASVVFIGLAWLCLLKCRTYVHEHKPVPDGFISSSSKQSRAARSLTQGIRLGSGSQSFNSGTITYTGSAKIFTLNDLEKATNNFDSSRILGEGGFGLVYKGILNDGRDVAVKILKRDDQRGGREFLAEVEMLSRLHHRNLVKLLGICTEKQTRCLVYELVPNGSVESHLHVADKVTDPLDWNSRMKIALGAARGLAYLHEDSNPCVIHRDFKASNILLEYDFTPKVSDFGLARTALDERNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVTWVRPLLTSKEGLQMIIDPYVKPNISVDTVVKVAAIASMCVQPEVSQRPFMGEVVQALKLVCSEFEETDFIKSKGSQEGLLTDVKGIFSEASGERVEFSECQKTFSGYQSNEEKVRLSASELLSTSGQEFESFRQYSRSGPLIIGKKRQFWQKLRSLSRGSSSEHGSH 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01781 850 PANTHER OS01G0750732 PROTEIN 6 848 - -
Gma08g01781 850 ProSiteProfiles Protein kinase domain profile. 467 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01781 850 ProSitePatterns Protein kinases ATP-binding region signature. 473 495 IPR017441 GO:0005524
Gma08g01781 850 PANTHER OS01G0750732 PROTEIN 6 848 - -
Gma08g01781 850 Gene3D Phosphorylase Kinase; domain 1 439 542 - -
Gma08g01781 850 Gene3D Transferase(Phosphotransferase) domain 1 543 761 - -
Gma08g01781 850 SUPERFAMILY Protein kinase-like (PK-like) 446 740 IPR011009 -
Gma08g01781 850 Pfam Protein tyrosine and serine/threonine kinase 470 740 IPR001245 GO:0004672|GO:0006468
Gma08g01781 850 MobiDBLite consensus disorder prediction 327 365 - -
Gma08g01781 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672|GO:0006468
Gma08g01781 850 MobiDBLite consensus disorder prediction 38 67 - -
Gma08g01781 850 CDD STKc_IRAK 473 741 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01781 Gma-Chr8 15850734 15856379 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01781 199 849 Receptor kinase-like Gene Family AT5G56890 59.697 0.0 763
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gma08g01781 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01781 - - gmx:100305431 1554.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01781 08 15850734 15856379 Gma08g01781 08 15850734 15856379 ECH
Gma07g00091 07 750033 755290 Gma08g01781 08 15850734 15856379 GST
Gma13g03138 13 45524777 45530172 Gma08g01781 08 15850734 15856379 PCT
Gma15g00228 15 2003861 2010424 Gma08g01781 08 15850734 15856379 PCT
Gma08g01781 08 15850734 15856379 Gma13g03138 13 45524777 45530172 PCT
Gma08g01781 08 15850734 15856379 Gma15g00228 15 2003861 2010424 PCT