Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01778 ATGCAGCCGAAATCTCACACCCCTTTTTTTGTCCCTCCCCAAAAAGCCATGAACAACAATAACCCTAACAACAACAGTAACAGAATCTCATCACCAAGAAATGGCAACAGCACTACCCAGGCTTGTGCTGCATGCAAGTACCAACGCAGAAAGTGTGCACCCGATTGCATTCTTGCACCTTACTTCCCTCACGAACGCCAACGCCAGTTCCTCAACGCGCACAAGTTGTTTGGCGTGAGCAACATCACCAAGATCATCAAGCTTCTCAGCCCTCAGGACAAGGACCAAGCCATGCGTACCATCATTTACCAATCCGACATGCGCGCTACAGATCCAGTTGGTGGTTGCTATAGGTACATTCTCGATCTCCAGGCCCAGATCGAGTACTATAGGGCGGAACTCGAACTCGTCCTTCAACAACTCGCCATTTTTAGAGCTCAGGCtcaacaacaacaacaacaacaacaacaacaacatggtatctatgctccaaacaacgttaatatcgctgtcaatggcgATGGCGAGGTTTTGAATGCTGATCCAATGGGATTGTACGACCAGCAACAACATTATCAGTGTCTTCAGCCACAACAACAGGAGCAGTATGCTATGATGCATGAAAATGGTCATGGAAGCCAAAACAGCGACGGCACTGCTTTCCAGGAACAAATAAACACGTGGGCTGTGCAGAACACTGCTGTGTCTCTTTCTTCGTTGTCGTTGCAAGGGCAGGGTAGTAATGTTAGCGATGGGTATGATCACAAGCCGGTGCTGGGGATTGACATGGATTCTGATGAGAGAAGTGAGTTAGGGTTCGAGTCTGAAGAATTAGTCCATCGCAGGTTTGTAAATTTATAG 861 0.4379 MQPKSHTPFFVPPQKAMNNNNPNNNSNRISSPRNGNSTTQACAACKYQRRKCAPDCILAPYFPHERQRQFLNAHKLFGVSNITKIIKLLSPQDKDQAMRTIIYQSDMRATDPVGGCYRYILDLQAQIEYYRAELELVLQQLAIFRAQAQQQQQQQQQQHGIYAPNNVNIAVNGDGEVLNADPMGLYDQQQHYQCLQPQQQEQYAMMHENGHGSQNSDGTAFQEQINTWAVQNTAVSLSSLSLQGQGSNVSDGYDHKPVLGIDMDSDERSELGFESEELVHRRFVNL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01778 286 MobiDBLite consensus disorder prediction 1 35 - -
Gma08g01778 286 ProSiteProfiles LOB domain profile. 40 141 IPR004883 -
Gma08g01778 286 Coils Coil 134 154 - -
Gma08g01778 286 MobiDBLite consensus disorder prediction 12 35 - -
Gma08g01778 286 PANTHER LOB DOMAIN-CONTAINING PROTEIN 22 35 245 - -
Gma08g01778 286 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 35 245 - -
Gma08g01778 286 Pfam Lateral organ boundaries (LOB) domain 41 136 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01778 Gma-Chr8 15812287 15813437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01778 40 155 AS2 family AT3G13850 74.138 8.34e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gma08g01778 LOB 3.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01778 - - gmx:100786728 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00087 07 719931 721979 Gma08g01778 08 15812287 15813437 GST
Gma13g03135 13 45509148 45509798 Gma08g01778 08 15812287 15813437 PCT
Gma08g01778 08 15812287 15813437 Gma13g03135 13 45509148 45509798 PCT