Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01766 ATGGGGCATCACTCTTGCTGCAACAAGCAGAAGGTCAAAAGAGGGCTATGGTCACCTGAAGAAGATGAAAAACTCATCAACTACATCACAACTTATGGACATGGTTGCTGGAGTTCTGTCCCAAAACTTGCAGGCCTTCAGAGGTGTGGAAAGAGTTGCAGATTAAGATGGATAAATTATCTAAGACCTGATTTGAAACGTGGAAGTTTCTCTCCTCAAGAAGCAGCCCTCATTATTGAACTCCACTGCATTTTAGGGAACAGATGGGCTCAGATAGCCAAGCACCTACCTGGAAGAACAGATAATGAGGTGAAAAACTTTTGGAATTCAAGCATAAAGAAGAAACTCCTTTCTCGTGATGTTAATATTCCTCCTTTAGCCACATTTTCTGATTTTCACAGCCCCGGCTTTAATGTTGGCACCATGGAAAGTTTATTCCCTTTTACTGCAAACCCTAATGTGATCCTAAATTTTCATCATCACGCAGACCAGCTCTACCTTCCCACCACACCAATATCCCCAATCCTAGAAGGTTTTGATCATATTAATAATGATGTAAAGTTAGGCATTGATAGCAATTACAATGCCAACAATTTTCTTCATATTCAGAATCCAACACCAGAAATAGTACTACCATTATCTTCCAATAATCCATCCTCTTATGAAGACACATGGTCATTGGGTTGTGTAGCTCTACATCTCAATCCAAATCAAGAAAATGACCAGATTATCAAAAGTGATGATACCACTTTACATTATGTTGTTGACAAATTCTTCAACCCAATGGCATTATTGCAGCATTATGAAGGTCAATTAGTAGAACCAATTGTGCCAAAAGTTAGTGACATTGAGGATTATGTTTGTAGTATCCAAGAACATGAGGCTACTACAGCAAAATTTCAGTGTTATTCACAAGATCTAACAGTGGCATCAAATCAATTAGAGTACATTGATGCCTTCATGTCATCGTTGCCTTCTTCAACAACTTCATCAGCAGCATCAAGCAGCCAAATAGTCCCAAACCCTATTCCTTCAGGATGGGAGTCTTGA 1050 0.3924 MGHHSCCNKQKVKRGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSPQEAALIIELHCILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSRDVNIPPLATFSDFHSPGFNVGTMESLFPFTANPNVILNFHHHADQLYLPTTPISPILEGFDHINNDVKLGIDSNYNANNFLHIQNPTPEIVLPLSSNNPSSYEDTWSLGCVALHLNPNQENDQIIKSDDTTLHYVVDKFFNPMALLQHYEGQLVEPIVPKVSDIEDYVCSIQEHEATTAKFQCYSQDLTVASNQLEYIDAFMSSLPSSTTSSAASSSQIVPNPIPSGWES 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01766 349 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Gma08g01766 349 SMART sant 13 63 IPR001005 -
Gma08g01766 349 SMART sant 66 114 IPR001005 -
Gma08g01766 349 PANTHER TRANSCRIPTION FACTOR MYB26 2 342 - -
Gma08g01766 349 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Gma08g01766 349 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gma08g01766 349 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Gma08g01766 349 CDD SANT 17 61 IPR001005 -
Gma08g01766 349 PANTHER MYB DOMAIN PROTEIN 55 2 342 - -
Gma08g01766 349 Gene3D - 11 67 - -
Gma08g01766 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Gma08g01766 349 MobiDBLite consensus disorder prediction 328 343 - -
Gma08g01766 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Gma08g01766 349 Gene3D - 69 116 - -
Gma08g01766 349 CDD SANT 69 109 IPR001005 -
Gma08g01766 349 MobiDBLite consensus disorder prediction 328 349 - -
Gma08g01766 349 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01766 Gma-Chr8 15720605 15721969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01766 1 118 MYB Transcription Factor Family AT3G13890 95.763 9.10e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma08g01766 Myb_DNA-binding 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01766 K09422 - gmx:102665409 714.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00077 07 638857 640205 Gma08g01766 08 15720605 15721969 GST