Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01765 ATGGGTGGTTCAGGAAGATGGCTTAAGTCGCTCATTTCTCTCAGAAGGCCCTCCCCAACTGATCAAGAGAAGGGTGGTGGCAAGAGTAAGAGACAGTGGAAGCTATGGAAGAGCACTTCAGAAGGGTTTGGGATTGGATCATCAATGCATAAGGGGCAAGGTGGTGGTGGTTCCTTTGTGGTAGATGGTGGAGCATTTGCTGCTGCTTTGGCTGCTGTGGTCAGAACTCCACTCAAAGACTTCATGGTCATCAAGCAGGAATGGGCTGCCATTCGTATCCAGGCAGTGTTTCGAGGTTTCTTGGCAAGACGAGCTTTGAGGGCCCTGAAGGCAGTGGTGAGGTTGCAAGCTATATTTCGTGGTTGGCAAGTGAGAAAGCAAGCAGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTGCGAGTTCAAGCACGTGTCAAGGCAAGGAATGTTGGGAACTCTCAAGAAGGGAAATATGCACGGTGCAATGAAGCTGATCCTGTTAAGCAAGCTGAGCAAGGGTGGTGTGACATTCCAAGAACTGCGGAAGAGGCAAAATTACAAATGAGGCAGGAAGGAGCAATTAAGAGGGATAGAACAAAGGCATATTCTCAGTCTAAGAAGAAATTGACAGCGAGTCCAAACTCAAGAGCTTCTAAGTCAGTGATTCCTCTCAAGAACCGCAAGCTAGACAGAAAGAGCTCGGGATGGAACATGCTAGATCGCTGGATGGCTGCAAAGCCATGGGAGAGCAGGTCAATGGTAGAGATGTATTTGGACTCACCTGTCATGACTCCAGTGACCAGTAAAAGTGATCATCTTGTTCTTCCCTTTAATTCGAATCAACAAATTGGCACGGTCAAAGCAAGAAGGAATGGTGTGACAACTAGGATTTCAACTAAATCTCTTACAACTAGTCAATCAACTCCATCATCTTCAGCCATAAGCTCTGAATGCATGTATGATGATAGCCCTATGTCAACTTCATGCACATCTGGATCCCCAGCTCGACCATCTAACAACAATGTTACAGTGGAACCAACAGAGGAAACAAATGCTTGTAAACCAAGCTACATGAATCTGACAGCATCAACCAAAGCTAAACTGAAACCCTGTAGGTGTTTTTCTCAGAATTCAAAGACAATCTTTATGGATGATTGTGTGTCACTAAGTGGAGTTACTAGAAGCAGTTCTGGTTCCTACCCTTCTGCTAATACATGGAAGAATCTCTATGCAACACCTCTAAGAACAAGTTATCAAAGACAATAG 1266 0.4534 MGGSGRWLKSLISLRRPSPTDQEKGGGKSKRQWKLWKSTSEGFGIGSSMHKGQGGGGSFVVDGGAFAAALAAVVRTPLKDFMVIKQEWAAIRIQAVFRGFLARRALRALKAVVRLQAIFRGWQVRKQAAVTLRCMQALVRVQARVKARNVGNSQEGKYARCNEADPVKQAEQGWCDIPRTAEEAKLQMRQEGAIKRDRTKAYSQSKKKLTASPNSRASKSVIPLKNRKLDRKSSGWNMLDRWMAAKPWESRSMVEMYLDSPVMTPVTSKSDHLVLPFNSNQQIGTVKARRNGVTTRISTKSLTTSQSTPSSSAISSECMYDDSPMSTSCTSGSPARPSNNNVTVEPTEETNACKPSYMNLTASTKAKLKPCRCFSQNSKTIFMDDCVSLSGVTRSSSGSYPSANTWKNLYATPLRTSYQRQ 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01765 421 MobiDBLite consensus disorder prediction 205 221 - -
Gma08g01765 421 Pfam IQ calmodulin-binding motif 88 107 IPR000048 GO:0005515
Gma08g01765 421 Pfam IQ calmodulin-binding motif 110 127 IPR000048 GO:0005515
Gma08g01765 421 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 420 - -
Gma08g01765 421 ProSiteProfiles IQ motif profile. 86 114 IPR000048 GO:0005515
Gma08g01765 421 SMART iq_5 85 107 IPR000048 GO:0005515
Gma08g01765 421 SMART iq_5 108 129 IPR000048 GO:0005515
Gma08g01765 421 MobiDBLite consensus disorder prediction 188 204 - -
Gma08g01765 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 128 IPR027417 -
Gma08g01765 421 MobiDBLite consensus disorder prediction 325 348 - -
Gma08g01765 421 MobiDBLite consensus disorder prediction 188 221 - -
Gma08g01765 421 Gene3D - 83 137 - -
Gma08g01765 421 PANTHER IQ-DOMAIN 5-RELATED 1 420 - -
Gma08g01765 421 ProSiteProfiles IQ motif profile. 110 137 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01765 Gma-Chr8 15705354 15707706 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01765 1 410 IQD Protein Family AT1G72670 44.289 2.03e-85 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01765 - - gmx:100806397 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma07g00076 07 623928 626771 Gma08g01765 08 15705354 15707706 GST
Gma13g03123 13 45426174 45428494 Gma08g01765 08 15705354 15707706 PCT
Gma15g00242 15 2105047 2107502 Gma08g01765 08 15705354 15707706 PCT