Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01754 ATGACACGGGGGAGGATAAGGGCGAGGCTCCGGAGGAGCCATCTTTACACATTTGGTTGCCTTAAGCCTTCTACCACTGAGGAGGCACCTCATCCACTTAATGGCCCCGGGTTCTCGCGAACTGTGTATTGCAACCAGCCTCTACTTCATGACAAGAAGCCTGTATTGTACTGCAAAAATGATATATCCACGACCAAGTACAATGTTATTACGTTTTTCCCCAAGGCACTCTTTGAACAATTTCGTAGGGTTGCTAATATATACTTCCTTTTGGCTGCATGTCTGTCAGCCTCTCCCATTTCGCCTTTCAGCCCACTGAGCATGATTGCTCCTTTGGCATTTGTTGTGGGGCTTAGTATGGCAAAGGAAGCATTGGAAGATTCGCGCAGGTTCCTTCAGGATGTCAAAGTTAATCGCCGGAAGGTTAATCGCCATAAAGGAGATGGTTTTTTTAGTCCCAGGTCGTGGCAGAACATTATGGTTGGGGATGTGGTCAAAGTGAACAAGGATCAATTTTTTCCAGCTGATTTGCTTCTCCTGTCCTCGAGTTATGAGGATGGGATTTGCTATGTGGAGACTATGAATTTAGATGGTGAGACCAACTTGAAGGTGAAAAGATCATCGGAGACCACCATGACTCTAGATAATGATGAAGTTTTTAAAGATTTCACTGGAACGATACGTTGTGAAGACCCAAACCCCAATCTTTACACGTTTGTTGGAAACTTAGAGTACGAGCGCCAGATTTATCCTCTTGATCCTAGTCAAATTCTTCTCCGAGATTCTAAGCTCAGGAACACTGATTACATCTATGGGGTGGCCATTTTCACTGGTCATGACAGCAAAGTCATGCAGAATTCCACAAAATCTCCTTCAAAAAGAAGCACAATAGAAAAGAAGATGGATTATATCATATACACCCTCTTCACTGTCCTTATTTTGATATCTGTTATTAGTTCCATAGGATTTATCTTCAAGACTAAGTACCAAGCCCCAAAGTGGTGGTATTTACGGCCCGACAATATTGAATATCAGTATGATCCCAACAAAGTTGGACTGGCTGGAATGAGTCATCTGATTACTGCACTTATTCTTTATGGATATTTGATACCCATCTCACTTTATGTTTCCATTGAGGTTGTAAAGGTTTTACAGGCAACCTTCATCAACCAAGACATTCAAATGTATGATGAAGAAACTGGGACTCCAGCTGATGCGCGGACATCAAATTTGAATGAAGAGTTGGGTCAGGTAGATACTATCCTGTCAGATAAAACTGGAACTTTGACATGTAACCAGATGGACTTTTTGAAGTGCTCCATTGCCGGTACTGCATATGGTGTGCGCTCCAGTGAAGTTGAAGTTGCTGCAGCGAAGCAGATGGCTTCTGATCATGAGGACCAGGATTCAGATCTCTCCAATTTCCCCATGCCTAAGAGTAAAGCACGCGTTTCATGGGATGATGTTAGAAAAGCTGAAGAAATTGAACTGGAGACTGTTGTTACTTCCAAAGGAGATGAGGATCAAAAGCATGCCATAAAGGGATTTGGTTTTGAAGATGACCGCCTCATGAATTGTAATTGGTTGAAAGAGCCCAATGCGGATGACCTTTTGATGTTCTTTCGTATATTAGCAGTTTGCCACACTGCCATTCCTGAGCTGAATGAGGAGACTGGTGTTTATACATATGAAGCTGAGTCACCTGATGAAGGGGCTTTTCTTGTAGCAGCAAGAGAATTTGGCTTTGCGTTTTGCAGAAGGACTCAGTCAAGTATTTTCATACATGAAAGATTTTCTGCTTCCGGGCAAGTGGTTGAAAGAGAGTACAAACTTTTGAATCTGCTGGATTTCACTAGTAAAAGAAAGCGTATGTCAGTGATTGTGCGTGATGAGGAGGGCAGTTTTCTTCTTCTTTGCAAGGGAGCTGACAGTATCATATTTGATCGATTGTCAAAGAATGGAAAAAATTATTTGGAGGCTACTACCAGACATCTAAATGAATACGGAGAAGCTGGTTTGAGAACACTAGCCCTGGCTTATAGAAAGCTTGATGAGCAAGAATACACTGCTTGGAACAATGAATTTCAGAAAGCCAAAGCAGCTGTTGGGGCAGACAGAGATTCAATGCTTGAGCGGGTATCAGATATGATGGAGAAAGAGTTGATTCTTGTTGGGGCTACTGCTGTGGAAGACAAACTGCAGAAAGGGGTTCCCCAATGTATTGATAATCTTGCTCAAGCTGGTCTCAAGATCTGGGTGTTGACAGGGGATAAGATGGAAACGGCAATCAACATTGGATTTGCTTGCAGTTTGCTTCGACAGGGTATGAAGCAGATCTGTATAACTACTCCTGTTACAGATTCAGTAGCCACTGATGTCAAACAGTTCTTTGTTTTAACACCCCAGGCTATCAAGGACAACATTTTAAATCAAATCACCAATGGTTCTCAAATGATAAAACTGGAGAAGGATCCTCATGCTGCATTTGCTTTAATTATTGATGGGAAAACTCTGACATATGCTCTAGAAGATGATATGAAGCTCCTATTTTTGGGATTGGCTGTTGATTGTGCATCTGTCATCTGCTGTCGTGTGTCTCCCAAGCAAAAGGCATTGGTAACCAGGTTAGTGAAACAAGGTTCTGGGAAGACTACTCTAGCAATAGGTGATGGTGCAAATGATGTTGGCATGATTCAAGAAGCAGATATTGGTGTTGGAATTAGTGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGTGACTTTGCGATTGCCCAATTTCGATTTTTGGAGAGGCTCCTGGTAGTCCATGGACATTGGTGTTACAAGAGAATTGCACAAATGATATGTTATTTCTTCTACAAGAACATTACATTTGGTCTCACCATCTTCTATTTTGAGGCCTTCACTGGCTTCTCTGGTCAATCGGTTTATGATGACTGGTACATGATATTGTTCAATGTTGTTCTGACATCGTTACCCGTCATTTCACTCGGTGTTTTTGAACAAGATGTTCCGTCAGAAGTTTGTTTACAGTTTCCTGCACTATATCAACAAGGACCCAAGAATTTGTTCTTTGACTGGTATAGAATATTGGGGTGGATGGGCAATGGTCTCTATGCCTCCCTCATCATCTTCTTCCTCATCGTCACCATCTTCTATGACCAAGCATTCCGTGCGGATGGCCAGGTAGCTGACATGGCTGCTGTTGGGACCACTATGTTCACTTGCATCATCTGGACTGTCAACTGTCAGATTGCTCTTACAATGAGCCACTTTACATGGATTCAGCACCTGTTTGTATGGGGTAGCATAGCCACTTGGTACATCTTTCTCTCCTTGTATGGAATGCTCTCTCCAGAATATTCCAAGAGTGCCTACCAAATACTGGTTGAATCTCTTGGTCCCGCACCCATTTACTGGGTAACAACCCTTTTAGTTACAGTTACATGCAATCTACCTTATTTTGCTCACATATCCTTCCAAAGATGTTTCAATCCCATGGACCATCACATTATCCAAGAAATCAAGTACTACAAAAAGGATATTGAGGATCAACACATGTGGACAAGGGAACGTTCTAAGGCCAGACAGGAAACCAAGATTGGGTTCACTGCAAGAGTGGAAGCAAAGATCAGGCAACTGAAGGGAAGACTGCAGAAGAAGCAATCTACCTTGGCTATTTCAGCCCCATCGTGA 3696 0.4261 MTRGRIRARLRRSHLYTFGCLKPSTTEEAPHPLNGPGFSRTVYCNQPLLHDKKPVLYCKNDISTTKYNVITFFPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSMAKEALEDSRRFLQDVKVNRRKVNRHKGDGFFSPRSWQNIMVGDVVKVNKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSSETTMTLDNDEVFKDFTGTIRCEDPNPNLYTFVGNLEYERQIYPLDPSQILLRDSKLRNTDYIYGVAIFTGHDSKVMQNSTKSPSKRSTIEKKMDYIIYTLFTVLILISVISSIGFIFKTKYQAPKWWYLRPDNIEYQYDPNKVGLAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDIQMYDEETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVEVAAAKQMASDHEDQDSDLSNFPMPKSKARVSWDDVRKAEEIELETVVTSKGDEDQKHAIKGFGFEDDRLMNCNWLKEPNADDLLMFFRILAVCHTAIPELNEETGVYTYEAESPDEGAFLVAAREFGFAFCRRTQSSIFIHERFSASGQVVEREYKLLNLLDFTSKRKRMSVIVRDEEGSFLLLCKGADSIIFDRLSKNGKNYLEATTRHLNEYGEAGLRTLALAYRKLDEQEYTAWNNEFQKAKAAVGADRDSMLERVSDMMEKELILVGATAVEDKLQKGVPQCIDNLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICITTPVTDSVATDVKQFFVLTPQAIKDNILNQITNGSQMIKLEKDPHAAFALIIDGKTLTYALEDDMKLLFLGLAVDCASVICCRVSPKQKALVTRLVKQGSGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNITFGLTIFYFEAFTGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYASLIIFFLIVTIFYDQAFRADGQVADMAAVGTTMFTCIIWTVNCQIALTMSHFTWIQHLFVWGSIATWYIFLSLYGMLSPEYSKSAYQILVESLGPAPIYWVTTLLVTVTCNLPYFAHISFQRCFNPMDHHIIQEIKYYKKDIEDQHMWTRERSKARQETKIGFTARVEAKIRQLKGRLQKKQSTLAISAPS 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01754 1231 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1229 - -
Gma08g01754 1231 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 860 969 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gma08g01754 1231 Pfam Cation transport ATPase (P-type) 546 651 - -
Gma08g01754 1231 Coils Coil 1204 1224 - -
Gma08g01754 1231 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Gma08g01754 1231 Gene3D - 113 288 - -
Gma08g01754 1231 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Gma08g01754 1231 PRINTS P-type cation-transporting ATPase superfamily signature 888 907 - -
Gma08g01754 1231 SUPERFAMILY HAD-like 410 932 IPR036412 -
Gma08g01754 1231 Pfam Phospholipid-translocating P-type ATPase C-terminal 916 1166 IPR032630 -
Gma08g01754 1231 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1174 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gma08g01754 1231 Gene3D - 724 928 IPR023214 -
Gma08g01754 1231 SUPERFAMILY Calcium ATPase, transduction domain A 146 286 IPR008250 -
Gma08g01754 1231 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Gma08g01754 1231 SFLD Haloacid Dehalogenase 405 939 - -
Gma08g01754 1231 CDD P-type_ATPase_APLT_Dnf-like 60 1047 - -
Gma08g01754 1231 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1229 - -
Gma08g01754 1231 Gene3D - 419 431 IPR023214 -
Gma08g01754 1231 Gene3D - 432 460 IPR023299 GO:0000166
Gma08g01754 1231 Gene3D - 592 723 IPR023299 GO:0000166
Gma08g01754 1231 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 1163 IPR023298 -
Gma08g01754 1231 SFLD p-type atpase 405 939 IPR044492 -
Gma08g01754 1231 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 686 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01754 Gma-Chr8 15611710 15617478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01754 1 1226 Primary Pumps ATPases AT1G17500 75.224 0.0 1952
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01754 K01530 - gmx:100819559 2430.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01754 08 15611710 15617478 Gma08g01754 08 15611710 15617478 ECH
Gma07g00071 07 574254 579663 Gma08g01754 08 15611710 15617478 GST
Gma13g03119 13 45373391 45379705 Gma08g01754 08 15611710 15617478 PCT
Gma15g00246 15 2144261 2150053 Gma08g01754 08 15611710 15617478 PCT
Gma08g01754 08 15611710 15617478 Gma13g03119 13 45373391 45379705 PCT
Gma08g01754 08 15611710 15617478 Gma15g00246 15 2144261 2150053 PCT