Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01753 ATGGAACCTCGAGTTGGGAACAAGTTCCGTCTCGGTCGGAAAATTGGTAGCGGATCTTTCGGAGAGATCTATCTCGGAACTAATATTCAGACTAATGAAGAGGTTGCGGTTAAGCTTGAAAGTGTCAAAACCAAGCATCCTCAATTGTTGTATGAATCCAAGCTGTATAAAATACTGCAGGGAGGAAATGGGATTCCAAATGTGAAATGGTATGGTGTTGAAGGAGAGTACAATGTGCTCGTGATGGATTTACTTGGCCCTAGCCTTGAAGATTTATTCAACTTCTGCAGTCGGAAATTGTCTCTCAAAACTGTTCTTATGCTTGCTGATCAGATGCTAAATCGAGTTGAATTTGTTCATTCCAAATCATTTTTACATCGCGACATCAAGCCAGACAACTTCCTCATGGGTTTAGGGAGGCGTGCAAATCAAGTGTATATTATTGACTTTGGCTTGGCCAAGAAATATAGAGACACCACTACACATCAGCATATTCCTTACAGAGAGAACAAGAATTTGACCGGAACTGCTAGGTATGCTAGTATGAATACTCATCTAGGAATTGAGCAAAGCCGTAGGGATGATTTAGAGTCACTTGGATATGTTCTTATGTACTTTTTAAGAGGAAGTCTGCCTTGGCAGGGATTGAAAGCTGGTACTAAGAAGCAGAAGTATGAGAAGATTAGTGAGAAGAAAGTTTCTACTTCTATTGAGTCTCTCTGTCGTGGCTATCCCTCAGAATTTGCTTCATACTTCCATTACTGCCGGTCACTGAGGTTTGATGATAAACCAGATTATGCTTATTTGAAAAGACTTCTTCGTGACCTTTTCATTCGTGAAGGATTCCAGTTTGATTATGTCTTTGATTGGACCATTTTGAAATATCAGCAATCTTCAAGTGTCACTGCCCCTGCCCGTGCTATTGGTCCTGCTGCTGGACCAAGTTCAGGCATGCCACCACTGGCTTCAAATGGTGACGGACAGTTAGGTGGAGAGGATGGTAATGGTAGGCCTACTAATTGGTCTTCATCAGATCCTACTCGTAGGAGAAACTCTGGAACTATTGCTAATGACGGAATCTTATCTAGACAAAAAGGCCCAGTTACATATGACTCAACTGGATCTAAAGATGCTATGTTGTCAAGTTCTAATTTCTTCTGGTCAAGTGGAACTGCAAAGCGAGGTGCTGTCTCAGGCAACCGTGATGTAGTTGGCAGTGAGACCGAGGCCTCTCGTTCTCTGATCCTGGATTCAAGTCAGGGAGCACTTCGTAAAATCCCTGCCCCTGGTGCTCAGAGAAGTTCAGCTATCATGTCATCTGAGCACAACCGAACATCCTCTGGCAGAAACACATCCAACATAAAGAATTTGGAGACAACTCTTAGGGGTATTGAGAGCCTGCATTTCAATGACGAGAGGGTACATTATTAG 1431 0.4277 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAVKLESVKTKHPQLLYESKLYKILQGGNGIPNVKWYGVEGEYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMLNRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTTTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLLRDLFIREGFQFDYVFDWTILKYQQSSSVTAPARAIGPAAGPSSGMPPLASNGDGQLGGEDGNGRPTNWSSSDPTRRRNSGTIANDGILSRQKGPVTYDSTGSKDAMLSSSNFFWSSGTAKRGAVSGNRDVVGSETEASRSLILDSSQGALRKIPAPGAQRSSAIMSSEHNRTSSGRNTSNIKNLETTLRGIESLHFNDERVHY 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01753 476 MobiDBLite consensus disorder prediction 306 374 - -
Gma08g01753 476 MobiDBLite consensus disorder prediction 428 453 - -
Gma08g01753 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Gma08g01753 476 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 461 IPR030509 GO:0004672|GO:0005524
Gma08g01753 476 Gene3D Transferase(Phosphotransferase) domain 1 1 308 - -
Gma08g01753 476 PANTHER CASEIN KINASE-RELATED 1 461 - -
Gma08g01753 476 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Gma08g01753 476 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01753 476 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Gma08g01753 476 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01753 476 MobiDBLite consensus disorder prediction 433 453 - -
Gma08g01753 476 MobiDBLite consensus disorder prediction 335 359 - -
Gma08g01753 476 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma08g01753 476 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01753 Gma-Chr8 15606903 15611114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01753 7 223 EF-hand Containing Proteins AT2G17890 26.667 9.66e-13 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Gma08g01753 Pkinase 1.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01753 K02218 - gmx:100819017 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma08g01753 08 15606903 15611114 Gma08g01753 08 15606903 15611114 ECH
Gma07g00070 07 569156 573224 Gma08g01753 08 15606903 15611114 GST
Gma13g03118 13 45365709 45371153 Gma08g01753 08 15606903 15611114 PCT
Gma15g00247 15 2152812 2157742 Gma08g01753 08 15606903 15611114 PCT