Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma08g01749 | ATGGGGAATCAGAAGCAGAAGTGGACGCAGGACGAAGAAGATGCTCTCATCGCCGGCGTTGAAAAGCACGGCCCCGGAAAGTGGAAGAACATTCTCAAGGATCCCCAATTCGCCCCTTTCCTCACTTCCCGTTCCAACATCGACCTCAAGGATAAATGGCGCAATTTGAGCGTCAGCAACGGTGCTCAGGGCTCCAAAGAAAAATCTAGGGTTCCCAAGCTTAAAGCCCTCCCTGCTCCTCCTGCTCCTACCGCCACTCCTCAGAACGCCGCTCCTGCTCTGCAAAACGCAGCATCTGATGTCACTCCCCCAGATGCTTCTCAGAATGACCAAGATGCCAAAAACCCTCCAAGGTATAATGCAATGATTTTTGAAGCTCTATCAGCGCTGAAAGATAGTAATGGATCTGACATGAATGCCATCATTAAATTCATGGAGGTACAAAATGGTTACAAGGTGAAAAAGGAAGCCTCCTCGGGGACAAAATCACCTTCACCAAAACCAAAGGATGTCCGGCCACCACAACCACAACAGCAATCCCCAGCTTCTGTCTTAATGACTAATGACACAATAAAGGAAGCTGCGGATACTGCAGCCTACAGAGTTGCTGATGCTGAAAGTAAATCATATCTGGCTGCAGAAGCAGTAAAGGAGGCTGAAAAAATATCATTGCTGGTTGAACATAGTGATTCAATGTTACAGCTAGCAAAAGATATATATGAACAATGTTCCCGTGGTGAAATTATCCTCTTGGCTTAA | 759 | 0.4677 | MGNQKQKWTQDEEDALIAGVEKHGPGKWKNILKDPQFAPFLTSRSNIDLKDKWRNLSVSNGAQGSKEKSRVPKLKALPAPPAPTATPQNAAPALQNAASDVTPPDASQNDQDAKNPPRYNAMIFEALSALKDSNGSDMNAIIKFMEVQNGYKVKKEASSGTKSPSPKPKDVRPPQPQQQSPASVLMTNDTIKEAADTAAYRVADAESKSYLAAEAVKEAEKISLLVEHSDSMLQLAKDIYEQCSRGEIILLA | 252 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma08g01749 | 252 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 1 | 62 | IPR017930 | - | |
Gma08g01749 | 252 | Gene3D | - | 8 | 83 | - | - | |
Gma08g01749 | 252 | SUPERFAMILY | Homeodomain-like | 2 | 58 | IPR009057 | - | |
Gma08g01749 | 252 | MobiDBLite | consensus disorder prediction | 58 | 117 | - | - | |
Gma08g01749 | 252 | Pfam | linker histone H1 and H5 family | 117 | 155 | IPR005818 | GO:0000786|GO:0003677|GO:0006334 | |
Gma08g01749 | 252 | ProSiteProfiles | Linker histone H1/H5 globular (H15) domain profile. | 115 | 214 | IPR005818 | GO:0000786|GO:0003677|GO:0006334 | |
Gma08g01749 | 252 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Gma08g01749 | 252 | PANTHER | SINGLE MYB HISTONE 4 | 1 | 146 | IPR044597 | GO:0003691 | |
Gma08g01749 | 252 | PANTHER | SINGLE MYB HISTONE 4 | 147 | 251 | IPR044597 | GO:0003691 | |
Gma08g01749 | 252 | ProSiteProfiles | Myb-like domain profile. | 1 | 57 | IPR001005 | - | |
Gma08g01749 | 252 | SUPERFAMILY | "Winged helix" DNA-binding domain | 114 | 151 | IPR036390 | - | |
Gma08g01749 | 252 | SMART | sant | 4 | 59 | IPR001005 | - | |
Gma08g01749 | 252 | MobiDBLite | consensus disorder prediction | 88 | 115 | - | - | |
Gma08g01749 | 252 | Gene3D | - | 111 | 163 | IPR036388 | - | |
Gma08g01749 | 252 | Coils | Coil | 252 | 252 | - | - | |
Gma08g01749 | 252 | MobiDBLite | consensus disorder prediction | 153 | 184 | - | - | |
Gma08g01749 | 252 | CDD | SANT_TRF | 6 | 56 | - | - | |
Gma08g01749 | 252 | Pfam | Myb-like DNA-binding domain | 5 | 56 | IPR001005 | - | |
Gma08g01749 | 252 | PANTHER | TELOMERE REPEAT-BINDING FACTOR 4-RELATED | 1 | 146 | - | - | |
Gma08g01749 | 252 | PANTHER | TELOMERE REPEAT-BINDING FACTOR 4-RELATED | 147 | 251 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma08g01749 | Gma-Chr8 | 15579103 | 15584708 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma08g01749 | 1 | 251 | Single Myb Histone (SMH) Gene Family | AT1G17520 | 40.614 | 4.79e-64 | 200 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Gma08g01749 | Myb_DNA-binding | 1.5e-10 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma08g01749 | K09422 | - | gmx:778177 | 432.95 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma07g00066 | 07 | 544773 | 549628 | Gma08g01749 | 08 | 15579103 | 15584708 | GST |