Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01698 ATGAAGAAGAAAGGTCCATGTTCGCATTGCAGAATTAGTTATACTCCACTTTGGCCTAATGGACCAGCTGATAAACCGGTGTTGTGTAACGCTTGTGGATCAAGATACAAGACAAGAGGACACCTTGACAATTATCTTCCCAAGAATGTCCATCCTCAGCCACACCACAAGAAATTTAAAAATGTAAATAGCGGAGGAAGTAATCTCAATGTTGAGCCTGAGCTTGAGTCCGGCAACCAACTTTTAAACCATGTTTCGCCTAGATCTACAACTAATGGTGACAGCGACAAGTTAACCTTAGATGTCCATCATATATCACCACAAGATTTTGGGAAGAAGATCCCATCAAAGAAACGGTCACCGATGGTGTACAAGCGTATGATACCAATGGAGAAGTTTCAAAAGCAGCTTGTTAAGTTGTATAAAAGTGAAAGACAACCAGAAGAGAGTGTTTTGGTGGATAACATGATGAACTTCATACCCGAAAATGAGATAGGACTTGGAACCATTCTTCTTAAGACAAATGATGATGATGCTTCTTCTACAGATAAATGTGGATCATCCACATCTGCACCCTGA 579 0.4041 MKKKGPCSHCRISYTPLWPNGPADKPVLCNACGSRYKTRGHLDNYLPKNVHPQPHHKKFKNVNSGGSNLNVEPELESGNQLLNHVSPRSTTNGDSDKLTLDVHHISPQDFGKKIPSKKRSPMVYKRMIPMEKFQKQLVKLYKSERQPEESVLVDNMMNFIPENEIGLGTILLKTNDDDASSTDKCGSSTSAP 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01698 192 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Gma08g01698 192 SMART GATA_3 1 60 IPR000679 GO:0006355|GO:0043565
Gma08g01698 192 PANTHER OSJNBB0038F03.10 PROTEIN 1 189 IPR044589 -
Gma08g01698 192 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Gma08g01698 192 PANTHER OSJNBB0038F03.10 PROTEIN 1 189 - -
Gma08g01698 192 Gene3D - 2 65 IPR013088 GO:0006355|GO:0008270
Gma08g01698 192 CDD ZnF_GATA 6 41 IPR000679 GO:0006355|GO:0043565
Gma08g01698 192 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01698 Gma-Chr8 15107728 15112636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma08g01698 1 173 C2C2-Gata Transcription Factor Family AT4G17570 28.111 6.46e-19 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Gma08g01698 GATA 1.8e-10 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01698 - - gsj:114423936 373.244